Integrative DNA Methylation and Gene Expression Analysis in the Prefrontal Cortex of Mexicans Who Died by Suicide

Genome-wide DNA methylation meta-analysis in the brains of suicide completers

(2020) Stefania Policicchio et al.   Translational Psychiatry

Single-nucleus transcriptomics of the prefrontal cortex in major depressive disorder implicates oligodendrocyte precursor cells and excitatory neurons

(2020) Corina Nagy et al.   NATURE NEUROSCIENCE

Worldwide trends in suicide mortality from 1990 to 2015 with a focus on the global recession time frame

(2019) Gianfranco Alicandro et al.   International Journal of Public Health

Poverty and suicide risk in older adults: A retrospective longitudinal cohort study

(2019) Jae Woo Choi et al.   INTERNATIONAL JOURNAL OF GERIATRIC PSYCHIATRY

Genome-wide DNA methylation in suicide victims revealing impact on gene expression

(2019) Katarina Kouter et al.   JOURNAL OF AFFECTIVE DISORDERS

Integrated analysis of environmental and genetic influences on cord blood DNA methylation in new-borns

(2019) Darina Czamara et al.   Nature Communications

Increased protein and mRNA expression of corticotropin-releasing factor (CRF), decreased CRF receptors and CRF binding protein in specific postmortem brain areas of teenage suicide subjects

(2019) Ghanshyam N. Pandey et al.   PSYCHONEUROENDOCRINOLOGY

Epigenetic impact of the social and physical environment on brain and body

(2019) Bruce S. McEwen et al.   METABOLISM-CLINICAL AND EXPERIMENTAL

Integrated genome-wide methylation and expression analyses reveal functional predictors of response to antidepressants

(2019) Chelsey Ju et al.   Translational Psychiatry

MethylToSNP: identifying SNPs in Illumina DNA methylation array data

(2019) Brenna A. LaBarre et al.   Epigenetics & Chromatin

Analyzing the genes and pathways related to major depressive disorder via a systems biology approach

(2019) Ting Fan et al.   Brain and Behavior

Epigenetic Changes in the CRH Gene are Related to Severity of Suicide Attempt and a General Psychiatric Risk Score in Adolescents

(2018) Jussi Jokinen et al.   EBioMedicine

Demographic and Clinical Characteristics of Completed Suicides in Mexico City 2014–2015

(2018) Ana L. Romero-Pimentel et al.   Frontiers in Psychiatry

Suicide rates across income levels: Retrospective cohort data on 1 million participants collected between 2003 and 2013 in South Korea

(2017) Sang-Uk Lee et al.   JOURNAL OF EPIDEMIOLOGY

Understanding epigenetic architecture of suicide neurobiology: A critical perspective

(2017) Bhaskar Roy et al.   NEUROSCIENCE AND BIOBEHAVIORAL REVIEWS

International Union of Basic and Clinical Pharmacology. CI. Structures and Small Molecule Modulators of Mammalian Adenylyl Cyclases

(2017) Carmen W. Dessauer et al.   PHARMACOLOGICAL REVIEWS

The Role of Neural Plasticity in Depression: From Hippocampus to Prefrontal Cortex

(2017) Wei Liu et al.   NEURAL PLASTICITY

Methylomic profiling of cortex samples from completed suicide cases implicates a role for PSORS1C3 in major depression and suicide

(2017) T M Murphy et al.   Translational Psychiatry

Epigenetic Regulation of the Kappa Opioid Receptor by Child Abuse

(2017) Pierre-Eric Lutz et al.   BIOLOGICAL PSYCHIATRY

Quantitative comparison of DNA methylation assays for biomarker development and clinical applications

(2016) Christoph Bock et al.   NATURE BIOTECHNOLOGY

Epigenetic Dysregulation in the Prefrontal Cortex of Suicide Completers

(2015) Eberhard Schneider et al.   CYTOGENETIC AND GENOME RESEARCH

Different stress-related gene expression in depression and suicide

(2015) J. Zhao et al.   JOURNAL OF PSYCHIATRIC RESEARCH

limma powers differential expression analyses for RNA-sequencing and microarray studies

(2015) Matthew E. Ritchie et al.   NUCLEIC ACIDS RESEARCH

Methylation of the Corticotropin Releasing Hormone Gene Promoter in BeWo Cells: Relationship to Gene Activity

(2015) Xin Pan et al.   International Journal of Endocrinology

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Functional DNA methylation in a transcript specific 3′UTR region of TrkB associates with suicide

(2014) Gilles Maussion et al.   Epigenetics

Astrocytic abnormalities and global DNA methylation patterns in depression and suicide

(2014) C Nagy et al.   MOLECULAR PSYCHIATRY

Genome-Wide Methylation Changes in the Brains of Suicide Completers

(2013) Benoit Labonté et al.   AMERICAN JOURNAL OF PSYCHIATRY

ChAMP: 450k Chip Analysis Methylation Pipeline

(2013) Tiffany J. Morris et al.   BIOINFORMATICS

A data-driven approach to preprocessing Illumina 450K methylation array data

(2013) Ruth Pidsley et al.   BMC GENOMICS

A cell epigenotype specific model for the correction of brain cellular heterogeneity bias and its application to age, brain region and major depression

(2013) Jerry Guintivano et al.   Epigenetics

Genome-wide Epigenetic Regulation by Early-Life Trauma

(2012) Benoit Labonté et al.   ARCHIVES OF GENERAL PSYCHIATRY

Differential Glucocorticoid Receptor Exon 1B, 1C, and 1H Expression and Methylation in Suicide Completers with a History of Childhood Abuse

(2012) Benoit Labonte et al.   BIOLOGICAL PSYCHIATRY

Altered expression of synapse and glutamate related genes in post-mortem hippocampus of depressed subjects

(2012) Vanja Duric et al.   INTERNATIONAL JOURNAL OF NEUROPSYCHOPHARMACOLOGY

Functions of DNA methylation: islands, start sites, gene bodies and beyond

(2012) Peter A. Jones   NATURE REVIEWS GENETICS

DNA Methylation and Its Basic Function

(2012) Lisa D Moore et al.   NEUROPSYCHOPHARMACOLOGY

Synaptic plasticity in depression: Molecular, cellular and functional correlates

(2012) W.N. Marsden   PROGRESS IN NEURO-PSYCHOPHARMACOLOGY & BIOLOGICAL PSYCHIATRY

TrkB gene expression and DNA methylation state in Wernicke area does not associate with suicidal behavior

(2011) Simona Keller et al.   JOURNAL OF AFFECTIVE DISORDERS

cAMP Response Element-Binding Protein Is a Primary Hub of Activity-Driven Neuronal Gene Expression

(2011) E. Benito et al.   JOURNAL OF NEUROSCIENCE

Epigenetic regulation of spermidine/spermine N1-acetyltransferase (SAT1) in Suicide

(2011) Laura M. Fiori et al.   JOURNAL OF PSYCHIATRIC RESEARCH

Stress and glucocorticoids regulated corticotropin releasing factor in rat prefrontal cortex

(2011) Qing-Yuan Meng et al.   MOLECULAR AND CELLULAR ENDOCRINOLOGY

Wide-ranging DNA methylation differences of primary trophoblast cell populations and derived cell lines: implications and opportunities for understanding trophoblast function†

(2011) Boris Novakovic et al.   MOLECULAR HUMAN REPRODUCTION

The stressed synapse: the impact of stress and glucocorticoids on glutamate transmission

(2011) Maurizio Popoli et al.   NATURE REVIEWS NEUROSCIENCE

Stress, glucocorticoids and glutamate release: Effects of antidepressant drugs

(2011) Laura Musazzi et al.   NEUROCHEMISTRY INTERNATIONAL

MetaBase--the wiki-database of biological databases

(2011) D. M. Bolser et al.   NUCLEIC ACIDS RESEARCH

Structural and synaptic plasticity in stress-related disorders

(2011) Daniel J. Christoffel et al.   REVIEWS IN THE NEUROSCIENCES

Glucocorticoids act on glutamatergic pathways to affect memory processes

(2011) Carmen Sandi   TRENDS IN NEUROSCIENCES

Colocalization of Protein Kinase A with Adenylyl Cyclase Enhances Protein Kinase A Activity during Induction of Long-Lasting Long-Term-Potentiation

(2011) Myungsook Kim et al.   PLoS Computational Biology

Increased BDNF Promoter Methylation in the Wernicke Area of Suicide Subjects

(2010) Simona Keller et al.   ARCHIVES OF GENERAL PSYCHIATRY

Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis

(2010) Pan Du et al.   BMC BIOINFORMATICS

Childhood adversities as risk factors for onset and persistence of suicidal behaviour

(2010) Ronny Bruffaerts et al.   BRITISH JOURNAL OF PSYCHIATRY

Epigenetics as a unifying principle in the aetiology of complex traits and diseases

(2010) Arturas Petronis   NATURE

CpG methylation of half-CRE sequences creates C/EBP  binding sites that activate some tissue-specific genes

(2010) V. Rishi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Chronic corticosterone exposure alters postsynaptic protein levels of PSD-95, NR1, and synaptopodin in the mouse brain

(2010) Julia W. Cohen et al.   SYNAPSE

Candidate Endophenotypes for Genetic Studies of Suicidal Behavior

(2009) J. John Mann et al.   BIOLOGICAL PSYCHIATRY

Epigenetic control

(2009) Geneviève P. Delcuve et al.   JOURNAL OF CELLULAR PHYSIOLOGY

Histone methylation and decreased expression of TrkB.T1 in orbital frontal cortex of suicide completers

(2009) C Ernst et al.   MOLECULAR PSYCHIATRY

Targeted and genome-scale strategies reveal gene-body methylation signatures in human cells

(2009) Madeleine P Ball et al.   NATURE BIOTECHNOLOGY

Epigenetic regulation of the glucocorticoid receptor in human brain associates with childhood abuse

(2009) Patrick O McGowan et al.   NATURE NEUROSCIENCE

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

GABAA Receptor Promoter Hypermethylation in Suicide Brain: Implications for the Involvement of Epigenetic Processes

(2008) Michael O. Poulter et al.   BIOLOGICAL PSYCHIATRY

NMDA-induced neuroprotection in hippocampal neurons is mediated through the protein kinase A and CREB (cAMP-response element-binding protein) pathway

(2008) E VALERA et al.   NEUROCHEMISTRY INTERNATIONAL

The link between childhood trauma and depression: Insights from HPA axis studies in humans

(2008) Christine Heim et al.   PSYCHONEUROENDOCRINOLOGY

The Dexamethasone/Corticotropin-Releasing Factor Test in Men with Major Depression: Role of Childhood Trauma

(2007) Christine Heim et al.   BIOLOGICAL PSYCHIATRY