DyP-Type Peroxidases: Recent Advances and Perspectives

Cryo-EM structure of Mycobacterium smegmatis DyP-loaded encapsulin

(2021) Yanting Tang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Functional genomic analysis of bacterial lignin degraders: diversity in mechanisms of lignin oxidation and metabolism

(2020) Rommel Santiago Granja-Travez et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

A DyP-Type Peroxidase of Pleurotus sapidus with Alkene Cleaving Activity

(2020) Nina-Katharina Krahe et al.   MOLECULES

Enzymatic and genetic characterization of lignin depolymerization by Streptomyces sp. S6 isolated from a tropical environment

(2020) Fatimah Azizah Riyadi et al.   Scientific Reports

Serial femtosecond zero dose crystallography captures a water‐free distal heme site in a dye‐decolourising peroxidase to reveal a catalytic role for an arginine in FeIV=O formation

(2020) Marina Lucic et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Structure of a robust bacterial protein cage and its application as a versatile biocatalytic platform through enzyme encapsulation

(2020) Nikola Lončar et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Characterization of a New DyP-Peroxidase from the Alkaliphilic Cellulomonad, Cellulomonas bogoriensis

(2019) Mohamed H. Habib et al.   MOLECULES

RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference

(2019) Alexey M Kozlov et al.   BIOINFORMATICS

Expression and Characterization of a Dye-Decolorizing Peroxidase from Pseudomonas Fluorescens Pf0-1

(2019) Nikola Lončar et al.   Catalysts

Degradation of antifungal anthraquinone compounds is a probable physiological role of DyP secreted by Bjerkandera adusta

(2019) Kanako Sugawara et al.   AMB Express

Different fungal peroxidases oxidize nitrophenols at a surface catalytic tryptophan

(2019) Dolores Linde et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

ModelTest-NG: A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models

(2019) Diego Darriba et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genomic and proteomic analysis of lignin degrading and polyhydroxyalkanoate accumulating β-proteobacterium Pandoraea sp. ISTKB

(2018) Madan Kumar et al.   Biotechnology for Biofuels

Structural and functional characterisation of multi-copper oxidase CueO from lignin-degrading bacterium Ochrobactrum sp. reveal its activity towards lignin model compounds and lignosulfonate

(2018) Rommel Santiago Granja-Travez et al.   FEBS Journal

Comprehensive investigation of a dye-decolorizing peroxidase and a manganese peroxidase from Irpex lacteus F17, a lignin-degrading basidiomycete

(2018) Zihong Duan et al.   AMB Express

Roles of distal aspartate and arginine of B-class dye-decolorizing peroxidase in heterolytic hydrogen peroxide cleavage

(2018) Vera Pfanzagl et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Dye-decolorizing peroxidases in Irpex lacteus combining the catalytic properties of heme peroxidases and laccase play important roles in ligninolytic system

(2018) Xing Qin et al.   Biotechnology for Biofuels

Cloning, characterization and paper pulp applications of a newly isolated DyP type peroxidase from Rhodococcus sp. T1

(2018) Miray Sahinkaya et al.   MOLECULAR BIOLOGY REPORTS

Characterization of a novel DyP-type peroxidase from Streptomyces avermitilis

(2017) Kanako Sugawara et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Cell-free one-pot conversion of (+)-valencene to (+)-nootkatone by a unique dye-decolorizing peroxidase combined with a laccase from Funalia trogii

(2017) Julia Kolwek et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Mechanistic Insights into Dye-Decolorizing Peroxidase Revealed by Solvent Isotope and Viscosity Effects

(2017) Ruben Shrestha et al.   ACS Catalysis

Identification, heterologous expression and characterization of a dye-decolorizing peroxidase of Pleurotus sapidus

(2017) Christiane Lauber et al.   AMB Express

Structure of Thermobifida fusca DyP-type peroxidase and activity towards Kraft lignin and lignin model compounds

(2016) Rahman Rahmanpour et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

Identification of Surface-Exposed Protein Radicals and A Substrate Oxidation Site in A-Class Dye-Decolorizing Peroxidase from Thermomonospora curvata

(2016) Ruben Shrestha et al.   ACS Catalysis

The DyP-type peroxidase DtpA is a Tat-substrate required for GlxA maturation and morphogenesis inStreptomyces

(2016) Marloes L. C. Petrus et al.   Open Biology

Description of the first fungal dye-decolorizing peroxidase oxidizing manganese(II)

(2015) Elena Fernández-Fueyo et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The toolbox of Auricularia auricula-judae dye-decolorizing peroxidase – Identification of three new potential substrate-interaction sites

(2015) Eric Strittmatter et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

Characterisation of Dyp-type peroxidases from Pseudomonas fluorescens Pf-5: Oxidation of Mn(II) and polymeric lignin by Dyp1B

(2015) Rahman Rahmanpour et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

Oxidation and nitration of mononitrophenols by a DyP-type peroxidase

(2015) Enrico Büttner et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

A structural and functional perspective of DyP-type peroxidase family

(2015) Toru Yoshida et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

An integrated view of redox and catalytic properties of B-type PpDyP from Pseudomonas putida MET94 and its distal variants

(2015) Sónia Mendes et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

Basidiomycete DyPs: Genomic diversity, structural–functional aspects, reaction mechanism and environmental significance

(2015) Dolores Linde et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

GlxA is a new structural member of the radical copper oxidase family and is required for glycan deposition at hyphal tips and morphogenesis ofStreptomyces lividans

(2015) Amanda K. Chaplin et al.   BIOCHEMICAL JOURNAL

Catalytic surface radical in dye-decolorizing peroxidase: a computational, spectroscopic and site-directed mutagenesis study

(2015) Dolores Linde et al.   BIOCHEMICAL JOURNAL

A Dye-Decolorizing Peroxidase from Vibrio cholerae

(2015) Takeshi Uchida et al.   BIOCHEMISTRY

Characterization of Dye-decolorizing Peroxidase (DyP) fromThermomonospora curvataReveals Unique Catalytic Properties of A-type DyPs

(2015) Chao Chen et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Anabaenasp. DyP-type peroxidase is a tetramer consisting of two asymmetric dimers

(2015) Toru Yoshida et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Characterization of aMycobacterium tuberculosisNanocompartment and Its Potential Cargo Proteins

(2014) Heidi Contreras et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Widespread Occurrence of Expressed Fungal Secretory Peroxidases in Forest Soils

(2014) Harald Kellner et al.   PLoS One

Application of a Novel Alkali-Tolerant Thermostable DyP-Type Peroxidase from Saccharomonospora viridis DSM 43017 in Biobleaching of Eucalyptus Kraft Pulp

(2014) Wangning Yu et al.   PLoS One

Heterologous expression and physicochemical characterization of a fungal dye-decolorizing peroxidase from Auricularia auricula-judae

(2014) Dolores Linde et al.   PROTEIN EXPRESSION AND PURIFICATION

Improved Manganese-Oxidizing Activity of DypB, a Peroxidase from a Lignolytic Bacterium

(2013) Rahul Singh et al.   ACS Chemical Biology

Characterization of a Novel Dye-Decolorizing Peroxidase (DyP)-Type Enzyme from Irpex lacteus and Its Application in Enzymatic Hydrolysis of Wheat Straw

(2013) D. Salvachua et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Radical formation on a conserved tyrosine residue is crucial for DyP activity

(2013) Eric Strittmatter et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

The Bacillus subtilis EfeUOB transporter is essential for high-affinity acquisition of ferrous and ferric iron

(2013) Marcus Miethke et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

Assemblyin vitroofRhodococcus jostii RHA1 encapsulin and peroxidase DypB to form a nanocompartment

(2013) Rahman Rahmanpour et al.   FEBS Journal

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Staphylococcus aureus FepA and FepB Proteins Drive Heme Iron Utilization in Escherichia coli

(2013) Evelyne Turlin et al.   PLoS One

Identification and Characterization of a Multifunctional Dye Peroxidase from a Lignin-Reactive Bacterium

(2012) Margaret E. Brown et al.   ACS Chemical Biology

Substrate oxidation by dye-decolorizing peroxidases (DyPs) from wood- and litter-degrading agaricomycetes compared to other fungal and plant heme-peroxidases

(2012) Christiane Liers et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Crystal structures of dye-decolorizing peroxidase with ascorbic acid and 2,6-dimethoxyphenol

(2012) Toru Yoshida et al.   FEBS LETTERS

Distal Heme Pocket Residues of B-type Dye-decolorizing Peroxidase

(2012) Rahul Singh et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Identification and Molecular Characterization of a Novel DyP-Type Peroxidase from Pseudomonas aeruginosa PKE117

(2011) Jing Li et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Characterization of Dye-Decolorizing Peroxidases fromRhodococcus jostiiRHA1

(2011) Joseph N. Roberts et al.   BIOCHEMISTRY

Identification of DypB fromRhodococcus jostiiRHA1 as a Lignin Peroxidase

(2011) Mark Ahmad et al.   BIOCHEMISTRY

Degradation of the synthetic dye amaranth by the fungus Bjerkandera adusta Dec 1: inference of the degradation pathway from an analysis of decolorized products

(2011) Nichina Gomi et al.   BIODEGRADATION

The catalytic mechanism of dye-decolorizing peroxidase DyP may require the swinging movement of an aspartic acid residue

(2011) Toru Yoshida et al.   FEBS Journal

Environmental Salinity Determines the Specificity and Need for Tat-Dependent Secretion of the YwbN Protein in Bacillus subtilis

(2011) René van der Ploeg et al.   PLoS One

Molecular Characterization of a Novel Peroxidase from the Cyanobacterium Anabaena sp. Strain PCC 7120

(2009) H. J. O. Ogola et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

DyP-like peroxidases of the jelly fungus Auricularia auricula-judae oxidize nonphenolic lignin model compounds and high-redox potential dyes

(2009) Christiane Liers et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

A robust and extracellular heme-containing peroxidase from Thermobifida fusca as prototype of a bacterial peroxidase superfamily

(2009) Edwin van Bloois et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Role of the Twin-Arginine Translocation Pathway in Staphylococcus

(2009) L. Biswas et al.   JOURNAL OF BACTERIOLOGY

Bacteria capture iron from heme by keeping tetrapyrrol skeleton intact

(2009) Sylvie Létoffé et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Purification, characterization, and identification of a novel bifunctional catalase-phenol oxidase from Scytalidium thermophilum

(2008) Didem Sutay Kocabas et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Degradation pathway of an anthraquinone dye catalyzed by a unique peroxidase DyP from Thanatephorus cucumeris Dec 1

(2008) Yasushi Sugano et al.   BIODEGRADATION

DyP-type peroxidases comprise a novel heme peroxidase family

(2008) Y. Sugano   CELLULAR AND MOLECULAR LIFE SCIENCES