- Home
- Publications
- Publication Search
- Publication Details
Title
Four-Dimensional Chromosome Structure Prediction
Authors
Keywords
-
Journal
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
Volume 22, Issue 18, Pages 9785
Publisher
MDPI AG
Online
2021-09-10
DOI
10.3390/ijms22189785
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- SciPy 1.0: fundamental algorithms for scientific computing in Python
- (2020) Pauli Virtanen et al. NATURE METHODS
- 4D Genome Rewiring during Oncogene-Induced and Replicative Senescence
- (2020) Satish Sati et al. MOLECULAR CELL
- Bayesian inference of chromatin structure ensembles from population-averaged contact data
- (2020) Simeon Carstens et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Transcriptional activation during cell reprogramming correlates with the formation of 3D open chromatin hubs
- (2020) Marco Di Stefano et al. Nature Communications
- 4D nucleome modeling
- (2020) Marco Di Stefano et al. CURRENT OPINION IN GENETICS & DEVELOPMENT
- An Overview of Methods for Reconstructing 3-D Chromosome and Genome Structures from Hi-C Data
- (2019) Oluwatosin Oluwadare et al. BIOLOGICAL PROCEDURES ONLINE
- Dynamics of genome reorganization during human cardiogenesis reveal an RBM20-dependent splicing factory
- (2019) Alessandro Bertero et al. Nature Communications
- A chromosome folding intermediate at the condensin-to-cohesin transition during telophase
- (2019) Kristin Abramo et al. NATURE CELL BIOLOGY
- A maximum likelihood algorithm for reconstructing 3D structures of human chromosomes from chromosomal contact data
- (2018) Oluwatosin Oluwadare et al. BMC GENOMICS
- Transcription factors orchestrate dynamic interplay between genome topology and gene regulation during cell reprogramming
- (2018) Ralph Stadhouders et al. NATURE GENETICS
- A pathway for mitotic chromosome formation
- (2018) Johan H. Gibcus et al. SCIENCE
- Chromatin conformation analysis of primary patient tissue using a low input Hi-C method
- (2018) Noelia Díaz et al. Nature Communications
- GITAR: An Open Source Tool for Analysis and Visualization of Hi-C Data
- (2018) Riccardo Calandrelli et al. GENOMICS PROTEOMICS & BIOINFORMATICS
- Cell-cycle dynamics of chromosomal organization at single-cell resolution
- (2017) Takashi Nagano et al. NATURE
- 3D genome structure modeling by Lorentzian objective function
- (2016) Tuan Trieu et al. NUCLEIC ACIDS RESEARCH
- The Hitchhiker’s guide to Hi-C analysis: Practical guidelines
- (2015) Bryan R. Lajoie et al. METHODS
- A statistical approach for inferring the 3D structure of the genome
- (2014) N. Varoquaux et al. BIOINFORMATICS
- A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping
- (2014) Suhas S.P. Rao et al. CELL
- Statistical confidence estimation for Hi-C data reveals regulatory chromatin contacts
- (2014) F. Ay et al. GENOME RESEARCH
- Single-cell Hi-C reveals cell-to-cell variability in chromosome structure
- (2013) Takashi Nagano et al. NATURE
- Topological domains in mammalian genomes identified by analysis of chromatin interactions
- (2012) Jesse R. Dixon et al. NATURE
- A three-dimensional model of the yeast genome
- (2010) Zhijun Duan et al. NATURE
- Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome
- (2009) E. Lieberman-Aiden et al. SCIENCE
- Long-range chromosomal interactions and gene regulation
- (2008) Adriana Miele et al. Molecular BioSystems
- Gene Regulation in the Third Dimension
- (2008) J. Dekker SCIENCE
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now