A GPU-accelerated fast multipole method based on barycentric Lagrange interpolation and dual tree traversal

Treecode-accelerated Green Iteration for Kohn-Sham Density Functional Theory

(2021) Nathan Vaughn et al.   JOURNAL OF COMPUTATIONAL PHYSICS

Interpolative Decomposition via Proxy Points for Kernel Matrices

(2020) Xin Xing et al.   SIAM JOURNAL ON MATRIX ANALYSIS AND APPLICATIONS

A GPU-Accelerated Fast Multipole Method for GROMACS: Performance and Accuracy

(2020) Bartosz Kohnke et al.   Journal of Chemical Theory and Computation

Hierarchical Matrix Operations on GPUs

(2019) Wajih Boukaram et al.   ACM TRANSACTIONS ON MATHEMATICAL SOFTWARE

Algorithm 967

(2016) Dhairya Malhotra et al.   ACM TRANSACTIONS ON MATHEMATICAL SOFTWARE

A GPU accelerated Barnes–Hut tree code for FLASH4

(2016) Gunther Lukat et al.   NEW ASTRONOMY

PVFMM: A Parallel Kernel Independent FMM for Particle and Volume Potentials

(2015) Dhairya Malhotra et al.   Communications in Computational Physics

The fast multipole method and point dipole moment polarizable force fields

(2015) Jonathan P. Coles et al.   JOURNAL OF CHEMICAL PHYSICS

Multilevel Summation Method for Electrostatic Force Evaluation

(2015) David J. Hardy et al.   Journal of Chemical Theory and Computation

XSEDE: Accelerating Scientific Discovery

(2014) John Towns et al.   COMPUTING IN SCIENCE & ENGINEERING

Task-Based FMM for Multicore Architectures

(2014) Emmanuel Agullo et al.   SIAM JOURNAL ON SCIENTIFIC COMPUTING

A GPU-accelerated direct-sum boundary integral Poisson–Boltzmann solver

(2013) Weihua Geng et al.   COMPUTER PHYSICS COMMUNICATIONS

MODYLAS: A Highly Parallelized General-Purpose Molecular Dynamics Simulation Program for Large-Scale Systems with Long-Range Forces Calculated by Fast Multipole Method (FMM) and Highly Scalable Fine-Grained New Parallel Processing Algorithms

(2013) Yoshimichi Andoh et al.   Journal of Chemical Theory and Computation

Comparison of treecodes for computing electrostatic potentials in charged particle systems with disjoint targets and sources

(2013) Henry A. Boateng et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

A treecode-accelerated boundary integral Poisson–Boltzmann solver for electrostatics of solvated biomolecules

(2013) Weihua Geng et al.   JOURNAL OF COMPUTATIONAL PHYSICS

A massively parallel adaptive fast multipole method on heterogeneous architectures

(2012) Ilya Lashuk et al.   COMMUNICATIONS OF THE ACM

Hierarchical N-body Simulations with Autotuning for Heterogeneous Systems

(2012) Rio Yokota et al.   COMPUTING IN SCIENCE & ENGINEERING

Optimizing the Accuracy and Efficiency of Fast Hierarchical Multipole Expansions for MD Simulations

(2012) Konstantin Lorenzen et al.   Journal of Chemical Theory and Computation

Biomolecular electrostatics using a fast multipole BEM on up to 512 gpus and a billion unknowns

(2011) Rio Yokota et al.   COMPUTER PHYSICS COMMUNICATIONS

A sparse octree gravitational N-body code that runs entirely on the GPU processor

(2011) Jeroen Bédorf et al.   JOURNAL OF COMPUTATIONAL PHYSICS

A Cartesian treecode for screened coulomb interactions

(2009) Peijun Li et al.   JOURNAL OF COMPUTATIONAL PHYSICS

The black-box fast multipole method

(2009) William Fong et al.   JOURNAL OF COMPUTATIONAL PHYSICS

Fast multipole methods on graphics processors

(2008) Nail A. Gumerov et al.   JOURNAL OF COMPUTATIONAL PHYSICS