Abundance and diversity of carbon-fixing bacterial communities in karst wetland soil ecosystems

Twenty-six years of chemical fertilization decreased soil RubisCO activity and changed the ecological characteristics of soil cbbL-carrying bacteria in an entisol

(2019) Zhi-Feng Zhou et al.   APPLIED SOIL ECOLOGY

Ferrigenium kumadai gen. nov., sp. nov., a microaerophilic iron-oxidizing bacterium isolated from a paddy field soil

(2018) Ashraf Khalifa et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Changes in soil microbial community and organic carbon fractions under short-term straw return in a rice–wheat cropping system

(2017) Zhaoming Chen et al.   SOIL & TILLAGE RESEARCH

Sulfuricaulis limicola gen. nov., sp. nov., a sulfur oxidizer isolated from a lake

(2016) Hisaya Kojima et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Long-term combined chemical and manure fertilizations increase soil organic carbon and total nitrogen in aggregate fractions at three typical cropland soils in China

(2015) Y.T. He et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Cropping systems modulate the rate and magnitude of soil microbial autotrophic CO2 fixation in soil

(2015) Xiaohong Wu et al.   Frontiers in Microbiology

The extended reductive acetyl-CoA pathway: ATPases in metal cluster maturation and reductive activation

(2014) Jae-Hun Jeoung et al.   BIOLOGICAL CHEMISTRY

Unravelling the Carbon and Sulphur Metabolism in Coastal Soil Ecosystems Using Comparative Cultivation-Independent Genome-Level Characterisation of Microbial Communities

(2014) Basit Yousuf et al.   PLoS One

Application of high-throughput sequencing in understanding human oral microbiome related with health and disease

(2014) Hui Chen et al.   Frontiers in Microbiology

Quantitative analyses of ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO) large-subunit genes (cbbL) in typical paddy soils

(2013) Ke-Qing Xiao et al.   FEMS MICROBIOLOGY ECOLOGY

Significant Role for Microbial Autotrophy in the Sequestration of Soil Carbon

(2012) Hongzhao Yuan et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ecological Aspects of the Distribution of Different Autotrophic CO2Fixation Pathways

(2011) Ivan A. Berg   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Long-term field fertilization alters the diversity of autotrophic bacteria based on the ribulose-1,5-biphosphate carboxylase/oxygenase (RubisCO) large-subunit genes in paddy soil

(2011) Hongzhao Yuan et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Beyond the Calvin Cycle: Autotrophic Carbon Fixation in the Ocean

(2010) Michael Hügler et al.   Annual Review of Marine Science

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Sulfuritalea hydrogenivorans gen. nov., sp. nov., a facultative autotroph isolated from a freshwater lake

(2010) H. Kojima et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Long-term manure and fertilizer effects on soil organic matter fractions and microbes under a wheat–maize cropping system in northern China

(2009) Wei Gong et al.   GEODERMA

Study of the distribution of autotrophic CO2 fixation cycles in Crenarchaeota

(2009) I. A. Berg et al.   MICROBIOLOGY-SGM