StrongestPath: a Cytoscape application for protein–protein interaction analysis

TRRUST v2: an expanded reference database of human and mouse transcriptional regulatory interactions

(2017) Heonjong Han et al.   NUCLEIC ACIDS RESEARCH

Census and evaluation of p53 target genes

(2017) M Fischer   ONCOGENE

HIPPIE v2.0: enhancing meaningfulness and reliability of protein–protein interaction networks

(2016) Gregorio Alanis-Lobato et al.   NUCLEIC ACIDS RESEARCH

HitPredict version 4: comprehensive reliability scoring of physical protein–protein interactions from more than 100 species

(2015) Yosvany López et al.   Database-The Journal of Biological Databases and Curation

UniProt: a hub for protein information

(2014)   NUCLEIC ACIDS RESEARCH

Molecular signatures database (MSigDB) 3.0

(2011) A. Liberzon et al.   BIOINFORMATICS

NetSlim: high-confidence curated signaling maps

(2011) R. Raju et al.   Database-The Journal of Biological Databases and Curation

Cytoscape 2.8: new features for data integration and network visualization

(2010) M. E. Smoot et al.   BIOINFORMATICS

The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored

(2010) D. Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

NetPath: a public resource of curated signal transduction pathways

(2010) Kumaran Kandasamy et al.   GENOME BIOLOGY