Advancing admixture graph estimation via maximum likelihood network orientation

Assessing the Performance of qpAdm: A Statistical Tool for Studying Population Admixture

(2021) Éadaoin Harney et al.   GENETICS

Inference of population admixture network from local gene genealogies: a coalescent-based maximum likelihood approach

(2020) Yufeng Wu   BIOINFORMATICS

Applying f 4 ‐statistics and admixture graphs: theory and examples

(2020) Mark Lipson   Molecular Ecology Resources

miqoGraph: fitting admixture graphs using mixed-integer quadratic optimization

(2020) Julia Yan et al.   BIOINFORMATICS

Genomic architecture and introgression shape a butterfly radiation

(2019) Nathaniel B. Edelman et al.   SCIENCE

Global Phylogeographic and Admixture Patterns in Grey Wolves and Genetic Legacy of An Ancient Siberian Lineage

(2019) Małgorzata Pilot et al.   Scientific Reports

Exploring the Tiers of Rooted Phylogenetic Network Space Using Tail Moves

(2018) Remie Janssen et al.   BULLETIN OF MATHEMATICAL BIOLOGY

Inferring Phylogenetic Networks Using PhyloNet

(2018) Dingqiao Wen et al.   SYSTEMATIC BIOLOGY

Rearrangement moves on rooted phylogenetic networks

(2017) Philippe Gambette et al.   PLoS Computational Biology

Admixture, Population Structure, and F-Statistics

(2016) B. M. Peter   GENETICS

The Simons Genome Diversity Project: 300 genomes from 142 diverse populations

(2016) Swapan Mallick et al.   NATURE

Counting Phylogenetic Networks

(2015) Colin McDiarmid et al.   Annals of Combinatorics

Massive migration from the steppe was a source for Indo-European languages in Europe

(2015) Wolfgang Haak et al.   NATURE

A global reference for human genetic variation

(2015) Richard A. Gibbs et al.   NATURE

Which Phylogenetic Networks are Merely Trees with Additional Arcs?

(2015) Andrew R. Francis et al.   SYSTEMATIC BIOLOGY

Maximum likelihood inference of reticulate evolutionary histories

(2014) Yun Yu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Reconstructing Austronesian population history in Island Southeast Asia

(2014) Mark Lipson et al.   Nature Communications

Efficient Moment-Based Inference of Admixture Parameters and Sources of Gene Flow

(2013) Mark Lipson et al.   MOLECULAR BIOLOGY AND EVOLUTION

Ancient Admixture in Human History

(2012) N. Patterson et al.   GENETICS

Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data

(2012) Joseph K. Pickrell et al.   PLoS Genetics

QUARTETS AND UNROOTED PHYLOGENETIC NETWORKS

(2012) PHILIPPE GAMBETTE et al.   Journal of Bioinformatics and Computational Biology

A Draft Sequence of the Neandertal Genome

(2010) R. E. Green et al.   SCIENCE