GAMMA: a tool for the rapid identification, classification and annotation of translated gene matches from sequencing data

Clinical evolution of AmpC-mediated ceftazidime-avibactam and cefiderocol resistance in Enterobacter cloacae complex following exposure to cefepime

(2020) Ryan K Shields et al.   CLINICAL INFECTIOUS DISEASES

Identification of a Carbapenemase-Producing Hypervirulent Klebsiella pneumoniae Isolate, United States

(2019) Maria Karlsson et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Validating the NCBI AMRFinder Tool and Resistance Gene Database Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of NARMS Isolates

(2019) Michael Feldgarden et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

P174E Substitution in GES-1 and GES-5 β-Lactamases Improves Catalytic Efficiency toward Carbapenems

(2018) Alessandra Piccirilli et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Identification of biomarkers for the differentiation of hypervirulent Klebsiella pneumoniae from classical K. pneumoniae

(2018) Thomas A Russo et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Multicenter Performance Assessment of Carba NP Test

(2017) Scott A. Cunningham et al.   JOURNAL OF CLINICAL MICROBIOLOGY

FDA-CDC Antimicrobial Resistance Isolate Bank: a Publicly Available Resource To Support Research, Development, and Regulatory Requirements

(2017) Joseph D. Lutgring et al.   JOURNAL OF CLINICAL MICROBIOLOGY

SSTAR, a Stand-Alone Easy-To-Use Antimicrobial Resistance Gene Predictor

(2016) Tom J. B. de Man et al.   mSphere

ARG-ANNOT, a New Bioinformatic Tool To Discover Antibiotic Resistance Genes in Bacterial Genomes

(2013) Sushim Kumar Gupta et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Identification of acquired antimicrobial resistance genes

(2012) E. Zankari et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Rate and molecular spectrum of spontaneous mutations in the bacterium Escherichia coli as determined by whole-genome sequencing

(2012) H. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS