Proton exit pathways surrounding the oxygen evolving complex of photosystem II
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Title
Proton exit pathways surrounding the oxygen evolving complex of photosystem II
Authors
Keywords
Proton transfer, Photosystem II, Oxygen evolving complex (OEC), Hydrogen bond network., Water channels, MCCE
Journal
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
Volume 1862, Issue 8, Pages 148446
Publisher
Elsevier BV
Online
2021-05-05
DOI
10.1016/j.bbabio.2021.148446
References
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Note: Only part of the references are listed.- Role of the O4 Channel in Photosynthetic Water Oxidation as Revealed by Fourier Transform Infrared Difference and Time-Resolved Infrared Analysis of the D1-S169A Mutant
- (2020) Yuichiro Shimada et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Roles of D1-Glu189 and D1-Glu329 in O2 Formation by the Water-Splitting Mn4Ca Cluster in Photosystem II
- (2020) Christopher J. Kim et al. BIOCHEMISTRY
- Proton Translocation via Tautomerization of Asn298 During the S2–S3 State Transition in the Oxygen-Evolving Complex of Photosystem II
- (2019) Maria Chrysina et al. JOURNAL OF PHYSICAL CHEMISTRY B
- D1-S169A Substitution of Photosystem II Perturbs Water Oxidation
- (2019) Ipsita Ghosh et al. BIOCHEMISTRY
- Relative stability of the S2 isomers of the oxygen evolving complex of photosystem II
- (2019) Divya Kaur et al. PHOTOSYNTHESIS RESEARCH
- One of the Substrate Waters for O2 Formation in Photosystem II Is Provided by the Water-Splitting Mn4CaO5 Cluster’s Ca2+ Ion
- (2019) Christopher J. Kim et al. BIOCHEMISTRY
- An oxyl/oxo mechanism for oxygen-oxygen coupling in PSII revealed by an x-ray free-electron laser
- (2019) Michihiro Suga et al. SCIENCE
- Network analysis of a proposed exit pathway for protons to the P-side of cytochrome c oxidase
- (2018) Xiuhong Cai et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- Structural Effects of Ammonia Binding to the Mn4CaO5 Cluster of Photosystem II
- (2018) David A. Marchiori et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Mechanism of Proton-Coupled Electron Transfer in the S0-to-S1 Transition of Photosynthetic Water Oxidation as Revealed by Time-Resolved Infrared Spectroscopy
- (2018) Tatsuki Shimizu et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Missing Pieces in the Puzzle of Biological Water Oxidation
- (2018) Dimitrios A. Pantazis ACS Catalysis
- Structures of the intermediates of Kok’s photosynthetic water oxidation clock
- (2018) Jan Kern et al. NATURE
- D1-Asn-298 in photosystem II is involved in a hydrogen-bond network near the redox-active tyrosine YZfor proton exit during water oxidation
- (2017) Ryo Nagao et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Substitution of the D1-Asn87site in photosystem II of cyanobacteria mimics the chloride-binding characteristics of spinach photosystem II
- (2017) Gourab Banerjee et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- The First State in the Catalytic Cycle of the Water-Oxidizing Enzyme: Identification of a Water-Derived μ-Hydroxo Bridge
- (2017) Thomas Lohmiller et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- OpenMM 7: Rapid development of high performance algorithms for molecular dynamics
- (2017) Peter Eastman et al. PLoS Computational Biology
- Crystallographic Data Support the Carousel Mechanism of Water Supply to the Oxygen-Evolving Complex of Photosystem II
- (2017) Jimin Wang et al. ACS Energy Letters
- The O2-Evolving Complex of Photosystem II: Recent Insights from Quantum Mechanics/Molecular Mechanics (QM/MM), Extended X-ray Absorption Fine Structure (EXAFS), and Femtosecond X-ray Crystallography Data
- (2016) Mikhail Askerka et al. ACCOUNTS OF CHEMICAL RESEARCH
- S3 State of the O2-Evolving Complex of Photosystem II: Insights from QM/MM, EXAFS, and Femtosecond X-ray Diffraction
- (2016) Mikhail Askerka et al. BIOCHEMISTRY
- Molecular simulation and modeling of complex I
- (2016) Gerhard Hummer et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- Redox-coupled substrate water reorganization in the active site of Photosystem II—The role of calcium in substrate water delivery
- (2016) Ilke Ugur et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- pKa of a Proton-Conducting Water Chain in Photosystem II
- (2016) Tomohiro Takaoka et al. Journal of Physical Chemistry Letters
- Interaction of methanol with the oxygen-evolving complex: atomistic models, channel identification, species dependence, and mechanistic implications
- (2016) Marius Retegan et al. Chemical Science
- Probing the Effect of Mutations of Asparagine 181 in the D1 Subunit of Photosystem II
- (2015) Ravi Pokhrel et al. BIOCHEMISTRY
- NH3 Binding to the S2 State of the O2-Evolving Complex of Photosystem II: Analogue to H2O Binding during the S2 → S3 Transition
- (2015) Mikhail Askerka et al. BIOCHEMISTRY
- FTIR studies of metal ligands, networks of hydrogen bonds, and water molecules near the active site Mn 4 CaO 5 cluster in Photosystem II
- (2015) Richard J. Debus BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- QM/MM study of the S2 to S3 transition reaction in the oxygen-evolving complex of photosystem II
- (2015) Mitsuo Shoji et al. CHEMICAL PHYSICS LETTERS
- New Perspectives on Proton Pumping in Cellular Respiration
- (2015) Mårten Wikström et al. CHEMICAL REVIEWS
- Oxygen-evolving complex of Photosystem II: an analysis of second-shell residues and hydrogen-bonding networks
- (2015) Leslie Vogt et al. CURRENT OPINION IN CHEMICAL BIOLOGY
- CHARMM-GUI Input Generator for NAMD, GROMACS, AMBER, OpenMM, and CHARMM/OpenMM Simulations Using the CHARMM36 Additive Force Field
- (2015) Jumin Lee et al. Journal of Chemical Theory and Computation
- Revised force-field parameters for chlorophyll-a, pheophytin-a and plastoquinone-9
- (2015) Federico Guerra et al. JOURNAL OF MOLECULAR GRAPHICS & MODELLING
- Dynamic Carboxylate/Water Networks on the Surface of the PsbO Subunit of Photosystem II
- (2015) Sebastian Lorch et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Proton-Coupled Electron Transfer During the S-State Transitions of the Oxygen-Evolving Complex of Photosystem II
- (2015) Muhamed Amin et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Ammonia Binds to the Dangler Manganese of the Photosystem II Oxygen-Evolving Complex
- (2015) Paul H. Oyala et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Arginine: Its pKavalue revisited
- (2015) Carolyn A. Fitch et al. PROTEIN SCIENCE
- Metal oxidation states in biological water splitting
- (2015) Vera Krewald et al. Chemical Science
- Energetics of proton release on the first oxidation step in the water-oxidizing enzyme
- (2015) Keisuke Saito et al. Nature Communications
- Pulse Electron Paramagnetic Resonance Studies of the Interaction of Methanol with the S2 State of the Mn4O5Ca Cluster of Photosystem II
- (2014) Paul H. Oyala et al. BIOCHEMISTRY
- Network of Hydrogen Bonds near the Oxygen-Evolving Mn4CaO5 Cluster of Photosystem II Probed with FTIR Difference Spectroscopy
- (2014) Rachel J. Service et al. BIOCHEMISTRY
- Evidence from FTIR Difference Spectroscopy That D1-Asp61 Influences the Water Reactions of the Oxygen-Evolving Mn4CaO5 Cluster of Photosystem II
- (2014) Richard J. Debus BIOCHEMISTRY
- On Ammonia Binding to the Oxygen-Evolving Complex of Photosystem II: A Quantum Chemical Study
- (2014) Johannes Schraut et al. CHEMISTRY-A EUROPEAN JOURNAL
- Structure, ligands and substrate coordination of the oxygen-evolving complex of photosystem II in the S2 state: a combined EPR and DFT study
- (2014) Thomas Lohmiller et al. PHYSICAL CHEMISTRY CHEMICAL PHYSICS
- Characterizing the proton loading site in cytochrome c oxidase
- (2014) J. Lu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Biological Water Oxidation
- (2013) Nicholas Cox et al. ACCOUNTS OF CHEMICAL RESEARCH
- Functional Roles of D2-Lys317 and the Interacting Chloride Ion in the Water Oxidation Reaction of Photosystem II As Revealed by Fourier Transform Infrared Analysis
- (2013) Hiroyuki Suzuki et al. BIOCHEMISTRY
- Mutation of Lysine 317 in the D2 Subunit of Photosystem II Alters Chloride Binding and Proton Transport
- (2013) Ravi Pokhrel et al. BIOCHEMISTRY
- Perturbing the Water Cavity Surrounding the Manganese Cluster by Mutating the Residue D1-Valine 185 Has a Strong Effect on the Water Oxidation Mechanism of Photosystem II
- (2013) Preston L. Dilbeck et al. BIOCHEMISTRY
- S0-State Model of the Oxygen-Evolving Complex of Photosystem II
- (2013) Rhitankar Pal et al. BIOCHEMISTRY
- Molecular mechanisms for generating transmembrane proton gradients
- (2013) M.R. Gunner et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- Reflections on substrate water and dioxygen formation
- (2013) Nicholas Cox et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- Ammonia binding to the oxygen-evolving complex of photosystem II identifies the solvent-exchangeable oxygen bridge ( -oxo) of the manganese tetramer
- (2013) M. Perez Navarro et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Exploring the energetics of water permeation in photosystem II by multiple steered molecular dynamics simulations
- (2012) Sergey Vassiliev et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- Extended protein/water H-bond networks in photosynthetic water oxidation
- (2012) Ana-Nicoleta Bondar et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- Water oxidation mechanism in photosystem II, including oxidations, proton release pathways, O―O bond formation and O2 release
- (2012) Per E.M. Siegbahn BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- Mechanisms for proton release during water oxidation in the S2 to S3 and S3 to S4 transitions in photosystem II
- (2012) Per E. M. Siegbahn PHYSICAL CHEMISTRY CHEMICAL PHYSICS
- Structural–Functional Role of Chloride in Photosystem II
- (2011) Ivan Rivalta et al. BIOCHEMISTRY
- S1-State Model of the O2-Evolving Complex of Photosystem II
- (2011) Sandra Luber et al. BIOCHEMISTRY
- Short Hydrogen Bond between Redox-Active Tyrosine YZand D1-His190 in the Photosystem II Crystal Structure
- (2011) Keisuke Saito et al. BIOCHEMISTRY
- MDAnalysis: A toolkit for the analysis of molecular dynamics simulations
- (2011) Naveen Michaud-Agrawal et al. JOURNAL OF COMPUTATIONAL CHEMISTRY
- Structural Coupling of an Arginine Side Chain with the Oxygen-Evolving Mn4Ca Cluster in Photosystem II As Revealed by Isotope-Edited Fourier Transform Infrared Spectroscopy
- (2011) Yuichiro Shimada et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å
- (2011) Yasufumi Umena et al. NATURE
- Evidence from FTIR Difference Spectroscopy of an Extensive Network of Hydrogen Bonds near the Oxygen-Evolving Mn4Ca Cluster of Photosystem II Involving D1-Glu65, D2-Glu312, and D1-Glu329
- (2010) Rachel J. Service et al. BIOCHEMISTRY
- Monitoring Proton Release during Photosynthetic Water Oxidation in Photosystem II by Means of Isotope-Edited Infrared Spectroscopy
- (2009) Hiroyuki Suzuki et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Probing the Accessibility of the Mn4Ca Cluster in Photosystem II: Channels Calculation, Noble Gas Derivatization, and Cocrystallization with DMSO
- (2009) Azat Gabdulkhakov et al. STRUCTURE
- Quantum Mechanics/Molecular Mechanics Study of the Catalytic Cycle of Water Splitting in Photosystem II
- (2008) Eduardo M. Sproviero et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Access channels and methanol binding site to the CaMn4 cluster in Photosystem II based on solvent accessibility simulations, with implications for substrate water access
- (2007) Felix M. Ho et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- Theoretical studies of proton-coupled electron transfer: Models and concepts relevant to bioenergetics
- (2007) S HAMMESSCHIFFER et al. COORDINATION CHEMISTRY REVIEWS
- FTIR detection of water reactions in the oxygen-evolving centre of photosystem II
- (2007) T. Noguchi PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
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