Presence ofmcr-1-positiveEnterobacteriaceaein retail chicken meat but not in humans in the Netherlands since 2009

Dissemination of the mcr-1 colistin resistance gene

(2016) Maris S Arcilla et al.   LANCET INFECTIOUS DISEASES

Colistin resistance gene mcr-1 harboured on a multidrug resistant plasmid

(2016) Surbhi Malhotra-Kumar et al.   LANCET INFECTIOUS DISEASES

Co-occurrence of extended spectrum β lactamase and MCR-1 encoding genes on plasmids

(2016) Marisa Haenni et al.   LANCET INFECTIOUS DISEASES

Dissemination of the mcr-1 colistin resistance gene

(2016) Hattie E Webb et al.   LANCET INFECTIOUS DISEASES

Colistin resistance gene mcr-1 and pHNSHP45 plasmid in human isolates of Escherichia coli and Klebsiella pneumoniae

(2016) Nicole Stoesser et al.   LANCET INFECTIOUS DISEASES

Investigation of a plasmid genome database for colistin-resistance gene mcr-1

(2016) Satowa Suzuki et al.   LANCET INFECTIOUS DISEASES

Dissemination of the mcr-1 colistin resistance gene

(2016) Abiola Olumuyiwa Olaitan et al.   LANCET INFECTIOUS DISEASES

Colistin resistance gene mcr-1 in extended-spectrum β-lactamase-producing and carbapenemase-producing Gram-negative bacteria in Germany

(2016) Linda Falgenhauer et al.   LANCET INFECTIOUS DISEASES

Emergence of plasmid-mediated colistin resistance mechanism MCR-1 in animals and human beings in China: a microbiological and molecular biological study

(2016) Yi-Yun Liu et al.   LANCET INFECTIOUS DISEASES

An outbreak of colistin-resistant Klebsiella pneumoniae carbapenemase-producing Klebsiella pneumoniae in the Netherlands (July to December 2013), with inter-institutional spread

(2015) V. Weterings et al.   EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES

Detection ofmcr-1encoding plasmid-mediated colistin-resistantEscherichia coliisolates from human bloodstream infection and imported chicken meat, Denmark 2015

(2015) Henrik Hasman et al.   Eurosurveillance

Use of colistin-containing products within the European Union and European Economic Area (EU/EEA): development of resistance in animals and possible impact on human and animal health

(2015) Boudewijn Catry et al.   INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS

Large Nosocomial Outbreak of Colistin-Resistant, Carbapenemase-Producing Klebsiella pneumoniae Traced to Clonal Expansion of anmgrBDeletion Mutant

(2015) Tommaso Giani et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Carbapenemase-Producing Enterobacteriaceae

(2015) David Paterson et al.   SEMINARS IN RESPIRATORY AND CRITICAL CARE MEDICINE

Characterization of a CTX-M-15 Producing Klebsiella Pneumoniae Outbreak Strain Assigned to a Novel Sequence Type (1427)

(2015) Kai Zhou et al.   Frontiers in Microbiology

Trends in Extended Spectrum Beta-Lactamase (ESBL) Producing Enterobacteriaceae and ESBL Genes in a Dutch Teaching Hospital, Measured in 5 Yearly Point Prevalence Surveys (2010-2014)

(2015) Ina Willemsen et al.   PLoS One

In SilicoDetection and Typing of Plasmids using PlasmidFinder and Plasmid Multilocus Sequence Typing

(2014) Alessandra Carattoli et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Detection of Extended-Spectrum Beta-Lactamase (ESBL)-Producing Escherichia coli on Flies at Poultry Farms

(2013) Hetty Blaak et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Comparative Analysis of ESBL-Positive Escherichia coli Isolates from Animals and Humans from the UK, The Netherlands and Germany

(2013) Guanghui Wu et al.   PLoS One

Extended-Spectrum β-Lactamase–Producing Escherichia coli From Retail Chicken Meat and Humans: Comparison of Strains, Plasmids, Resistance Genes, and Virulence Factors

(2012) Jan A. J. W. Kluytmans et al.   CLINICAL INFECTIOUS DISEASES

Identification of acquired antimicrobial resistance genes

(2012) E. Zankari et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS