Inferring Cell Subtypes and LncRNA Function by a Cell-Specific CeRNA Network in Breast Cancer

Characterization of super‐enhancer associated functional lncRNAs acting as ceRNAs in ESCC

(2020) Qiu‐Yu Wang et al.   Molecular Oncology

LncRNA GATA3‐AS1 facilitates tumour progression and immune escape in triple‐negative breast cancer through destabilization of GATA3 but stabilization of PD‐L1

(2020) Ming Zhang et al.   CELL PROLIFERATION

Long Noncoding RNA NEAT1 Promotes the Progression of Breast Cancer by Regulating miR-138-5p/ZFX Axis

(2020) Lige Yao et al.   CANCER BIOTHERAPY AND RADIOPHARMACEUTICALS

Systems toxicogenomics of prenatal low-dose BPA exposure on liver metabolic pathways, gut microbiota, and metabolic health in mice

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LnCeCell: a comprehensive database of predicted lncRNA-associated ceRNA networks at single-cell resolution

(2020) Peng Wang et al.   NUCLEIC ACIDS RESEARCH

Cell-specific network constructed by single-cell RNA sequencing data

(2019) Hao Dai et al.   NUCLEIC ACIDS RESEARCH

Single Cell Gene Co-Expression Network Reveals FECH/CROT Signature as a Prognostic Marker

(2019) Xin Chen et al.   Cells

Breast cancer statistics, 2019

(2019) Carol E. DeSantis et al.   CA-A CANCER JOURNAL FOR CLINICIANS

MiR-410 Acts as a Tumor Suppressor in Estrogen Receptor-Positive Breast Cancer Cells by Directly Targeting ERLIN2 via the ERS Pathway

(2018) Hewen Wu et al.   CELLULAR PHYSIOLOGY AND BIOCHEMISTRY

A non-canonical tumor suppressive role for the long non-coding RNA MALAT1 in colon and breast cancers

(2018) Zhi Hao Kwok et al.   INTERNATIONAL JOURNAL OF CANCER

NEAT1 contributes to breast cancer progression through modulating miR-448 and ZEB1

(2018) Xing Jiang et al.   JOURNAL OF CELLULAR PHYSIOLOGY

Unravelling subclonal heterogeneity and aggressive disease states in TNBC through single-cell RNA-seq

(2018) Mihriban Karaayvaz et al.   Nature Communications

LNCipedia 5: towards a reference set of human long non-coding RNAs

(2018) Pieter-Jan Volders et al.   NUCLEIC ACIDS RESEARCH

Single-Cell Transcriptome Analysis Reveals Estrogen Signaling Coordinately Augments One-Carbon, Polyamine, and Purine Synthesis in Breast Cancer

(2018) Detu Zhu et al.   Cell Reports

TCL1A Single-Nucleotide Polymorphisms and Estrogen-Mediated Toll-Like Receptor-MYD88–Dependent Nuclear Factor- κ B Activation: Single-Nucleotide Polymorphism– and Selective Estrogen Receptor Modulator–Dependent Modification of Inflammation and Immune Response

(2017) Ming-Fen Ho et al.   MOLECULAR PHARMACOLOGY

miR-302a/b/c/d cooperatively inhibit BCRP expression to increase drug sensitivity in breast cancer cells

(2016) Yan Wang et al.   GYNECOLOGIC ONCOLOGY

MiR-302a/b/c/d cooperatively sensitizes breast cancer cells to adriamycin via suppressing P-glycoprotein(P-gp) by targeting MAP/ERK kinase kinase 1 (MEKK1)

(2016) Lin Zhao et al.   JOURNAL OF EXPERIMENTAL & CLINICAL CANCER RESEARCH

Personalized characterization of diseases using sample-specific networks

(2016) Xiaoping Liu et al.   NUCLEIC ACIDS RESEARCH

Competing endogenous RNA network analysis identifies critical genes among the different breast cancer subtypes

(2016) Juan Chen et al.   Oncotarget

Apoptosis-antagonizing transcription factor (AATF) gene silencing: role in induction of apoptosis and down-regulation of estrogen receptor in breast cancer cells

(2013) Monika Sharma   BIOTECHNOLOGY LETTERS

starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein–RNA interaction networks from large-scale CLIP-Seq data

(2013) Jun-Hao Li et al.   NUCLEIC ACIDS RESEARCH

Low p53 Binding Protein 1 (53BP1) Expression Is Associated With Increased Local Recurrence in Breast Cancer Patients Treated With Breast-Conserving Surgery and Radiotherapy

(2012) Hanmanth J.R. Neboori et al.   INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS

KLF4 suppresses estrogen-dependent breast cancer growth by inhibiting the transcriptional activity of ERα

(2009) K Akaogi et al.   ONCOGENE

fdrtool: a versatile R package for estimating local and tail area-based false discovery rates

(2008) K. Strimmer   BIOINFORMATICS