The Comparative Analyses of Six Complete Chloroplast Genomes of Morphologically Diverse Chenopodium album L. (Amaranthaceae) Collected in Korea

The complete chloroplast genomes of seventeen Aegilops tauschii: genome comparative analysis and phylogenetic inference

(2020) Qing Su et al.   PeerJ

Analysis of complete chloroplast genome sequence of Korean landrace Cymbidium goeringii

(2020) Heng Wang et al.   3 Biotech

The complete chloroplast genome of Oxybasis glauca (L.) S. Fuentes, Uotila & Borsch (Amaranthaceae) as the first chloroplast genome in genus Oxybasis

(2020) Yongsung Kim et al.   Mitochondrial DNA Part B-Resources

The comparison of the complete chloroplast genome of Suaeda japonica Makino presenting different external morphology (Amaranthaceae)

(2020) Yongsung Kim et al.   Mitochondrial DNA Part B-Resources

Complete chloroplast genome sequence of Barleria prionitis, comparative chloroplast genomics and phylogenetic relationships among Acanthoideae

(2020) Dhafer A. Alzahrani et al.   BMC GENOMICS

Evolutionary and phylogenetic aspects of the chloroplast genome of Chaenomeles species

(2020) Jiahui Sun et al.   Scientific Reports

Molecular markers from the chloroplast genome of rose provide a complementary tool for variety discrimination and profiling

(2020) Changhong Li et al.   Scientific Reports

The Complete Chloroplast Genome Sequences of 14 Curcuma Species: Insights Into Genome Evolution and Phylogenetic Relationships Within Zingiberales

(2020) Heng Liang et al.   Frontiers in Genetics

Comprehensive Analyses of the Complete Mitochondrial Genome of Figulus binodulus (Coleoptera: Lucanidae)

(2020) Jungmo Lee et al.   JOURNAL OF INSECT SCIENCE

The Complete Chloroplast Genome of Arabidopsis thaliana Isolated in Korea (Brassicaceae): An Investigation of Intraspecific Variations of the Chloroplast Genome of Korean A. thaliana

(2020) Jongsun Park et al.   International Journal of Genomics

The complete mitochondrial genome of new species candidate of Rosa rugosa (Rosaceae)

(2020) Jongsun Park et al.   Mitochondrial DNA Part B-Resources

The complete chloroplast genome sequence of Dysphania pumilio (R.Br.) Mosyakin & Clemants (Amaranthaceae)

(2019) Yongsung Kim et al.   Mitochondrial DNA Part B-Resources

Wild Origins of Macadamia Domestication Identified Through Intraspecific Chloroplast Genome Sequencing

(2019) Catherine J. Nock et al.   Frontiers in Plant Science

Parental origin and genome evolution of several Eurasian hexaploid species of Chenopodium (Chenopodiaceae)

(2019) BOZENA KOLANO et al.   Phytotaxa

The complete chloroplast genome of Chenopodium ficifolium Sm. (Amaranthaceae)

(2019) Yongsung Kim et al.   Mitochondrial DNA Part B-Resources

OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expanded toolkit for the graphical visualization of organellar genomes

(2019) Stephan Greiner et al.   NUCLEIC ACIDS RESEARCH

Characterization of the complete plastome of Atriplex centralasiatica (Chenopodiaceae), an annual halophytic herb

(2019) Xue-Jie Zhang et al.   Mitochondrial DNA Part B-Resources

Characterization of the complete chloroplast genome of Suaeda salsa (Amaranthaceae/Chenopodiaceae), an annual succulent halophyte

(2019) Xiao-Jian Qu et al.   Mitochondrial DNA Part B-Resources

The complete chloroplast genome of an annual halophyte herb, Suaeda glauca (Amaranthaceae)

(2019) Xiao-Jian Qu et al.   Mitochondrial DNA Part B-Resources

Plant species richness across the Himalaya driven by evolutionary history and current climate

(2019) Suresh K. Rana et al.   Ecosphere

Intraspecific Variation within the Utricularia amethystina Species Morphotypes Based on Chloroplast Genomes

(2019) Saura R. Silva et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Combining complete chloroplast genome sequences with target loci data and morphology to resolve species limits in Triplostegia (Caprifoliaceae)

(2018) Yan-Ting Niu et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Towards a better understanding of the Chenopodium album aggregate (Amaranthaceae) in the Middle East: A karyological, cytometric and morphometric investigation

(2018) Farzaneh Habibi et al.   Journal of Systematics and Evolution

Development of Chloroplast Genomic Resources in Chinese Yam (Dioscorea polystachya)

(2018) Junling Cao et al.   Biomed Research International

The complete plastid genome of Suaeda malacosperma (Amaranthaceae/Chenopodiaceae), a vulnerable halophyte in coastal regions of Korea and Japan

(2018) Jong-Soo Park et al.   Mitochondrial DNA Part B-Resources

Hybridization and polyploidization within the Chenopodium album aggregate analysed by means of cytological and molecular markers

(2018) Bohumil Mandák et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Characterization of the complete chloroplast genome of Gymnocarpos przewalskii, an endangered species in China and Mongolia

(2017) Zhaoping Yang et al.   Conservation Genetics Resources

Plastome Sequencing of Ten Nonmodel Crop Species Uncovers a Large Insertion of Mitochondrial DNA in Cashew

(2017) Samar O. Rabah et al.   Plant Genome

Complete Chloroplast Genome Sequences and Comparative Analysis of Chenopodium quinoa and C. album

(2017) Su-Young Hong et al.   Frontiers in Plant Science

Characterization of the complete chloroplast genome of Chenopodium quinoa Willd

(2017) Kangyu Wang et al.   Mitochondrial DNA Part B-Resources

Genome size stability across EurasianChenopodiumspecies (Amaranthaceae)

(2016) Petr Vít et al.   BOTANICAL JOURNAL OF THE LINNEAN SOCIETY

Three decades of nanopore sequencing

(2016) David Deamer et al.   NATURE BIOTECHNOLOGY

Coming of age: ten years of next-generation sequencing technologies

(2016) Sara Goodwin et al.   NATURE REVIEWS GENETICS

tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes

(2016) Todd M. Lowe et al.   NUCLEIC ACIDS RESEARCH

How genome size variation is linked with evolution within Chenopodium sensu lato

(2016) Bohumil Mandák et al.   PERSPECTIVES IN PLANT ECOLOGY EVOLUTION AND SYSTEMATICS

Allopolyploid Origin of Chenopodium album s. str. (Chenopodiaceae): A Molecular and Cytogenetic Insight

(2016) Karol Krak et al.   PLoS One

Comparative analysis of the complete chloroplast genome sequences in psammophyticHaloxylonspecies (Amaranthaceae)

(2016) Wenpan Dong et al.   PeerJ

The complete chloroplast genome sequence of Bienertia sinuspersici

(2016) Beomsoo Kim et al.   Mitochondrial DNA Part B-Resources

The effect of polyploidy and hybridization on the evolution of floral colour inNicotiana(Solanaceae)

(2015) Elizabeth W. McCarthy et al.   ANNALS OF BOTANY

SMRT sequencing only de novo assembly of the sugar beet (Beta vulgaris) chloroplast genome

(2015) Kai Bernd Stadermann et al.   BMC BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Is hybridization involved in the evolution of the Chenopodium album aggregate? An analysis based on chromosome counts and genome size estimation

(2012) Bohumil Mandák et al.   FLORA

Increased Phenotypic Plasticity to Climate May Have Boosted the Invasion Success of Polyploid Centaurea stoebe

(2012) Min A. Hahn et al.   PLoS One

Optimizing de novo transcriptome assembly from short-read RNA-Seq data: a comparative study

(2011) Qiong-Yi Zhao et al.   BMC BIOINFORMATICS

KNOX genes: versatile regulators of plant development and diversity

(2010) A. Hay et al.   DEVELOPMENT

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH