Simultaneous trimodal single-cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Simultaneous trimodal single-cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq
Authors
Keywords
-
Journal
eLife
Volume 10, Issue -, Pages -
Publisher
eLife Sciences Publications, Ltd
Online
2021-04-09
DOI
10.7554/elife.63632
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Joint profiling of chromatin accessibility and CAR-T integration site analysis at population and single-cell levels
- (2020) Wenliang Wang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Index and biological spectrum of human DNase I hypersensitive sites
- (2020) Wouter Meuleman et al. NATURE
- Massively parallel single-cell mitochondrial DNA genotyping and chromatin profiling
- (2020) Caleb A. Lareau et al. NATURE BIOTECHNOLOGY
- A human circulating immune cell landscape in aging and COVID-19
- (2020) Yingfeng Zheng et al. Protein & Cell
- Evaluating Daratumumab in the Treatment of Multiple Myeloma: Safety, Efficacy and Place in Therapy
- (2020) Danai Dima et al. Cancer Management and Research
- Comprehensive Integration of Single-Cell Data
- (2019) Tim Stuart et al. CELL
- Droplet-based combinatorial indexing for massive-scale single-cell chromatin accessibility
- (2019) Caleb A. Lareau et al. NATURE BIOTECHNOLOGY
- Massively parallel single-cell chromatin landscapes of human immune cell development and intratumoral T cell exhaustion
- (2019) Ansuman T. Satpathy et al. NATURE BIOTECHNOLOGY
- High-throughput sequencing of the transcriptome and chromatin accessibility in the same cell
- (2019) Song Chen et al. NATURE BIOTECHNOLOGY
- Ensembl 2020
- (2019) Andrew D Yates et al. NUCLEIC ACIDS RESEARCH
- SCALE method for single-cell ATAC-seq analysis via latent feature extraction
- (2019) Lei Xiong et al. Nature Communications
- OUP accepted manuscript
- (2018) BIOINFORMATICS
- Osmotic modulation of chromatin impacts on efficiency and kinetics of cell fate modulation
- (2018) A. F. Lima et al. Scientific Reports
- A Single-Cell Atlas of In Vivo Mammalian Chromatin Accessibility
- (2018) Darren A. Cusanovich et al. CELL
- Joint profiling of chromatin accessibility and gene expression in thousands of single cells
- (2018) Junyue Cao et al. SCIENCE
- Shared and distinct transcriptomic cell types across neocortical areas
- (2018) Bosiljka Tasic et al. NATURE
- Dimensionality reduction for visualizing single-cell data using UMAP
- (2018) Etienne Becht et al. NATURE BIOTECHNOLOGY
- Joint single-cell DNA accessibility and protein epitope profiling reveals environmental regulation of epigenomic heterogeneity
- (2018) Xingqi Chen et al. Nature Communications
- A rapid and robust method for single cell chromatin accessibility profiling
- (2018) Xi Chen et al. Nature Communications
- An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues
- (2017) M Ryan Corces et al. NATURE METHODS
- Simultaneous epitope and transcriptome measurement in single cells
- (2017) Marlon Stoeckius et al. NATURE METHODS
- Daratumumab: a first-in-class CD38 monoclonal antibody for the treatment of multiple myeloma
- (2016) Larysa Sanchez et al. Journal of Hematology & Oncology
- Lineage-specific and single-cell chromatin accessibility charts human hematopoiesis and leukemia evolution
- (2016) M Ryan Corces et al. NATURE GENETICS
- Single-cell chromatin accessibility reveals principles of regulatory variation
- (2015) Jason D. Buenrostro et al. NATURE
- Chromatin compaction under mixed salt conditions: Opposite effects of sodium and potassium ions on nucleosome array folding
- (2015) Abdollah Allahverdi et al. Scientific Reports
- Determination and Inference of Eukaryotic Transcription Factor Sequence Specificity
- (2014) Matthew T. Weirauch et al. CELL
- UpSet: Visualization of Intersecting Sets
- (2014) Alexander Lex et al. IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS
- Predicting the molecular complexity of sequencing libraries
- (2013) Timothy Daley et al. NATURE METHODS
- Software for Computing and Annotating Genomic Ranges
- (2013) Michael Lawrence et al. PLoS Computational Biology
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
- (2010) A. McKenna et al. GENOME RESEARCH
- Model-based Analysis of ChIP-Seq (MACS)
- (2008) Yong Zhang et al. GENOME BIOLOGY
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started