Mechanistic model of nutrient uptake explains dichotomy between marine oligotrophic and copiotrophic bacteria

Systematic Variation in Marine Dissolved Organic Matter Stoichiometry and Remineralization Ratios as a Function of Lability

(2019) Emily J. Zakem et al.   GLOBAL BIOGEOCHEMICAL CYCLES

Resource allocation and metabolism: the search for governing principles

(2018) Markus Basan   CURRENT OPINION IN MICROBIOLOGY

Low affinity uniporter carrier proteins can increase net substrate uptake rate by reducing efflux

(2018) Evert Bosdriesz et al.   Scientific Reports

The gram-negative bacterial periplasm: Size matters

(2018) Samuel I. Miller et al.   PLOS BIOLOGY

Heterotrophic substrate specificity in the aquatic environment: The role of microscale patchiness investigated using modeling

(2018) Ferdi L. Hellweger   ENVIRONMENTAL MICROBIOLOGY

Why Do Fast-Growing Bacteria Enter Overflow Metabolism? Testing the Membrane Real Estate Hypothesis

(2017) Mariola Szenk et al.   Cell Systems

Growth Rates of Microbes in the Oceans

(2016) David L. Kirchman   Annual Review of Marine Science

Transcriptional Control in Marine Copiotrophic and Oligotrophic Bacteria with Streamlined Genomes

(2016) Matthew T. Cottrell et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The intrinsic rate constants in diffusion-influenced reactions

(2016) Adithya Vijaykumar et al.   FARADAY DISCUSSIONS

Challenges in microbial ecology: building predictive understanding of community function and dynamics

(2016) Stefanie Widder et al.   ISME Journal

The intrinsic rate constants in diffusion-influenced reactions

(2016) Adithya Vijaykumar et al.   FARADAY DISCUSSIONS

The Protein Cost of Metabolic Fluxes: Prediction from Enzymatic Rate Laws and Cost Minimization

(2016) Elad Noor et al.   PLoS Computational Biology

Binding proteins enhance specific uptake rate by increasing the substrate-transporter encounter rate

(2015) Evert Bosdriesz et al.   FEBS Journal

Terrestrial and marine perspectives on modeling organic matter degradation pathways

(2015) Adrian B. Burd et al.   GLOBAL CHANGE BIOLOGY

Proteome reallocation in Escherichia coli with increasing specific growth rate

(2015) Karl Peebo et al.   Molecular BioSystems

How do divergent ecological strategies emerge among marine bacterioplankton lineages?

(2015) Haiwei Luo et al.   TRENDS IN MICROBIOLOGY

Diffusion within the Cytoplasm: A Mesoscale Model of Interacting Macromolecules

(2014) Fabio Trovato et al.   BIOPHYSICAL JOURNAL

Implications of streamlining theory for microbial ecology

(2014) Stephen J Giovannoni et al.   ISME Journal

Emergence of robust growth laws from optimal regulation of ribosome synthesis

(2014) M. Scott et al.   Molecular Systems Biology

Metabolic costs of amino acid and protein production inEscherichia coli

(2013) Christoph Kaleta et al.   Biotechnology Journal

Expression patterns reveal niche diversification in a marine microbial assemblage

(2012) Scott M Gifford et al.   ISME Journal

The Original Michaelis Constant: Translation of the 1913 Michaelis–Menten Paper

(2011) Kenneth A. Johnson et al.   BIOCHEMISTRY

Genomic and functional adaptation in surface ocean planktonic prokaryotes

(2010) Shibu Yooseph et al.   NATURE

Transporter genes expressed by coastal bacterioplankton in response to dissolved organic carbon

(2009) Rachel S. Poretsky et al.   ENVIRONMENTAL MICROBIOLOGY

The presence of the glycolysis operon in SAR11 genomes is positively correlated with ocean productivity

(2009) M. S. Schwalbach et al.   ENVIRONMENTAL MICROBIOLOGY

Shifts in growth strategies reflect tradeoffs in cellular economics

(2009) Douwe Molenaar et al.   Molecular Systems Biology

The genomic basis of trophic strategy in marine bacteria

(2009) F. M. Lauro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nutrient uptake rate as a function of cell size and surface transporter density: A Michaelis-like approximation to the model of Pasciak and Gavis

(2008) Robert A. Armstrong   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea

(2008) Sarah M Sowell et al.   ISME Journal

Structure, Function, and Evolution of Bacterial ATP-Binding Cassette Systems

(2008) A. L. Davidson et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS