Fast, cell-resolution, contiguous-wide two-photon imaging to reveal functional network architectures across multi-modal cortical areas

Fundamental bounds on the fidelity of sensory cortical coding

(2020) Oleg I. Rumyantsev et al.   NATURE

Superficial layers suppress the deep layers to fine tune cortical coding

(2019) Scott R. Pluta et al.   JOURNAL OF NEUROSCIENCE

Scale-free networks are rare

(2019) Anna D. Broido et al.   Nature Communications

Rational Engineering of XCaMPs, a Multicolor GECI Suite for In Vivo Imaging of Complex Brain Circuit Dynamics

(2019) Masatoshi Inoue et al.   CELL

Volumetric Ca2+ Imaging in the Mouse Brain Using Hybrid Multiplexed Sculpted Light Microscopy

(2019) Siegfried Weisenburger et al.   CELL

Spontaneous behaviors drive multidimensional, brainwide activity

(2019) Carsen Stringer et al.   SCIENCE

Two-Color Volumetric Imaging of Neuronal Activity of Cortical Columns

(2019) Shuting Han et al.   Cell Reports

Controlling Visually Guided Behavior by Holographic Recalling of Cortical Ensembles

(2019) Luis Carrillo-Reid et al.   CELL

High-performance calcium sensors for imaging activity in neuronal populations and microcompartments

(2019) Hod Dana et al.   NATURE METHODS

Single-trial neural dynamics are dominated by richly varied movements

(2019) Simon Musall et al.   NATURE NEUROSCIENCE

Preferential inputs from cholecystokinin-positive neurons to the somatic compartment of parvalbumin-expressing neurons in the mouse primary somatosensory cortex

(2018) Hiroyuki Hioki et al.   BRAIN RESEARCH

A Suite of Transgenic Driver and Reporter Mouse Lines with Enhanced Brain-Cell-Type Targeting and Functionality

(2018) Tanya L. Daigle et al.   CELL

Vision and Locomotion Shape the Interactions between Neuron Types in Mouse Visual Cortex

(2018) Mario Dipoppa et al.   NEURON

Efficient and accurate extraction of in vivo calcium signals from microendoscopic video data

(2018) Pengcheng Zhou et al.   eLife

Designing a large field-of-view two-photon microscope using optical invariant analysis

(2018) Jonathan R. Bumstead   Neurophotonics

Robustness of Spike Deconvolution for Neuronal Calcium Imaging

(2018) Marius Pachitariu et al.   JOURNAL OF NEUROSCIENCE

Pyramidal cell regulation of interneuron survival sculpts cortical networks

(2018) Fong Kuan Wong et al.   NATURE

In vivo measurement of afferent activity with axon-specific calcium imaging

(2018) Gerard Joey Broussard et al.   NATURE NEUROSCIENCE

Fully integrated silicon probes for high-density recording of neural activity

(2017) James J. Jun et al.   NATURE

In vivo three-photon imaging of activity of GCaMP6-labeled neurons deep in intact mouse brain

(2017) Dimitre G Ouzounov et al.   NATURE METHODS

Lattice system of functionally distinct cell types in the neocortex

(2017) Hisato Maruoka et al.   SCIENCE

Brain heating induced by near-infrared lasers during multiphoton microscopy

(2016) Kaspar Podgorski et al.   JOURNAL OF NEUROPHYSIOLOGY

Allogeneic transplantation of iPS cell-derived cardiomyocytes regenerates primate hearts

(2016) Yuji Shiba et al.   NATURE

Wide field-of-view, multi-region, two-photon imaging of neuronal activity in the mammalian brain

(2016) Jeffrey N Stirman et al.   NATURE BIOTECHNOLOGY

Improving data quality in neuronal population recordings

(2016) Kenneth D Harris et al.   NATURE NEUROSCIENCE

Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data

(2016) Eftychios A. Pnevmatikakis et al.   NEURON

Survival of corticostriatal neurons by Rho/Rho-kinase signaling pathway

(2016) Kenta Kobayashi et al.   NEUROSCIENCE LETTERS

Top-down cortical input during NREM sleep consolidates perceptual memory

(2016) D. Miyamoto et al.   SCIENCE

Long-Term Optical Access to an Estimated One Million Neurons in the Live Mouse Cortex

(2016) Tony Hyun Kim et al.   Cell Reports

A large field of view two-photon mesoscope with subcellular resolution for in vivo imaging

(2016) Nicholas James Sofroniew et al.   eLife

A novel optical microscope for imaging large embryos and tissue volumes with sub-cellular resolution throughout

(2016) Gail McConnell et al.   eLife

Long-range population dynamics of anatomically defined neocortical networks

(2016) Jerry L Chen et al.   eLife

Small-World Propensity and Weighted Brain Networks

(2016) Sarah Feldt Muldoon et al.   Scientific Reports

A Top-Down Cortical Circuit for Accurate Sensory Perception

(2015) Satoshi Manita et al.   NEURON

Cellular Level Brain Imaging in Behaving Mammals: An Engineering Approach

(2015) Elizabeth J.O. Hamel et al.   NEURON

A Cellular Resolution Map of Barrel Cortex Activity during Tactile Behavior

(2015) Simon P. Peron et al.   NEURON

A synaptic and circuit basis for corollary discharge in the auditory cortex

(2014) David M. Schneider et al.   NATURE

NeuroGrid: recording action potentials from the surface of the brain

(2014) Dion Khodagholy et al.   NATURE NEUROSCIENCE

Long-range and local circuits for top-down modulation of visual cortex processing

(2014) S. Zhang et al.   SCIENCE

Viral transduction of the neonatal brain delivers controllable genetic mosaicism for visualising and manipulating neuronal circuitsin vivo

(2013) Ji-Yoen Kim et al.   EUROPEAN JOURNAL OF NEUROSCIENCE

Nav1.1 haploinsufficiency in excitatory neurons ameliorates seizure-associated sudden death in a mouse model of Dravet syndrome

(2013) Ikuo Ogiwara et al.   HUMAN MOLECULAR GENETICS

Ultrasensitive fluorescent proteins for imaging neuronal activity

(2013) Tsai-Wen Chen et al.   NATURE

Effect of Three Types of Mixed Anesthetic Agents Alternate to Ketamine in Mice

(2011) Sumiko KAWAI et al.   EXPERIMENTAL ANIMALS

Inhibitory interneurons in a cortical column form hot zones of inhibition in layers 2 and 5A

(2011) H. S. Meyer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Volume measurements in three-dimensional microscopy

(2010) T. D. Visser et al.   SCANNING

Long-term, high-resolution imaging in the mouse neocortex through a chronic cranial window

(2009) Anthony Holtmaat et al.   Nature Protocols

Power-Law Distributions in Empirical Data

(2009) Aaron Clauset et al.   SIAM REVIEW

A Small World of Neuronal Synchrony

(2008) Shan Yu et al.   CEREBRAL CORTEX