Human and preclinical studies of the host–gut microbiome co-metabolite hippurate as a marker and mediator of metabolic health

The Natural Metabolite 4-Cresol Improves Glucose Homeostasis and Enhances β-Cell Function

(2020) Francois Brial et al.   Cell Reports

Statin therapy is associated with lower prevalence of gut microbiota dysbiosis

(2020) Sara Vieira-Silva et al.   NATURE

The human microbiome in health and disease: hype or hope

(2019) Gwen Falony et al.   ACTA CLINICA BELGICA

Quantitative microbiome profiling disentangles inflammation- and bile duct obstruction-associated microbiota alterations across PSC/IBD diagnoses

(2019) Sara Vieira-Silva et al.   Nature Microbiology

The MetaCyc database of metabolic pathways and enzymes - a 2019 update

(2019) Ron Caspi et al.   NUCLEIC ACIDS RESEARCH

Molecular phenomics and metagenomics of hepatic steatosis in non-diabetic obese women

(2018) Lesley Hoyles et al.   NATURE MEDICINE

Metabolic retroconversion of trimethylamine N-oxide and the gut microbiota

(2018) Lesley Hoyles et al.   Microbiome

Richness and ecosystem development across faecal snapshots of the gut microbiota

(2018) Gwen Falony et al.   Nature Microbiology

Quantitative Lipoprotein Subclass and Low Molecular Weight Metabolite Analysis in Human Serum and Plasma by 1H NMR Spectroscopy in a Multilaboratory Trial

(2018) Beatriz Jiménez et al.   ANALYTICAL CHEMISTRY

Common gut microbial metabolites of dietary flavonoids exert potent protective activities in β-cells and skeletal muscle cells

(2018) Benjamin F. Bitner et al.   JOURNAL OF NUTRITIONAL BIOCHEMISTRY

BRENDA in 2019: a European ELIXIR core data resource

(2018) Lisa Jeske et al.   NUCLEIC ACIDS RESEARCH

Untangling the relationship between diet and visceral fat mass through blood metabolomics and gut microbiome profiling

(2017) T Pallister et al.   INTERNATIONAL JOURNAL OF OBESITY

Quantitative microbiome profiling links gut community variation to microbial load

(2017) Doris Vandeputte et al.   NATURE

Enterotypes in the landscape of gut microbial community composition

(2017) Paul I. Costea et al.   Nature Microbiology

Hippurate as a metabolomic marker of gut microbiome diversity: Modulation by diet and relationship to metabolic syndrome

(2017) Tess Pallister et al.   Scientific Reports

Persistent microbiome alterations modulate the rate of post-dieting weight regain

(2016) Christoph A. Thaiss et al.   NATURE

Human gut microbes impact host serum metabolome and insulin sensitivity

(2016) Helle Krogh Pedersen et al.   NATURE

The Human Intestinal Microbiome in Health and Disease

(2016) Susan V. Lynch et al.   NEW ENGLAND JOURNAL OF MEDICINE

Population-level analysis of gut microbiome variation

(2016) Gwen Falony et al.   SCIENCE

Species–function relationships shape ecological properties of the human gut microbiome

(2016) Sara Vieira-Silva et al.   Nature Microbiology

A guide to the identification of metabolites in NMR-based metabonomics/metabolomics experiments

(2016) Anthony C. Dona et al.   Computational and Structural Biotechnology Journal

Personalized Nutrition by Prediction of Glycemic Responses

(2015) David Zeevi et al.   CELL

Quantifying Diet-Induced Metabolic Changes of the Human Gut Microbiome

(2015) Saeed Shoaie et al.   Cell Metabolism

The microbiome and its pharmacological targets: therapeutic avenues in cardiometabolic diseases

(2015) Ana Luisa Neves et al.   CURRENT OPINION IN PHARMACOLOGY

Towards biome-specific analysis of meta-omics data

(2015) Youssef Darzi et al.   ISME Journal

Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota

(2015) Kristoffer Forslund et al.   NATURE

Urinary metabolic signatures of human adiposity

(2015) Paul Elliott et al.   Science Translational Medicine

Precision High-Throughput Proton NMR Spectroscopy of Human Urine, Serum, and Plasma for Large-Scale Metabolic Phenotyping

(2014) Anthony C. Dona et al.   ANALYTICAL CHEMISTRY

Microbial Determinants of Biochemical Individuality and Their Impact on Toxicology and Pharmacology

(2014) Andrew D. Patterson et al.   Cell Metabolism

Artificial sweeteners induce glucose intolerance by altering the gut microbiota

(2014) Jotham Suez et al.   NATURE

An integrated catalog of reference genes in the human gut microbiome

(2014) Junhua Li et al.   NATURE BIOTECHNOLOGY

A New Equation to Estimate Glomerular Filtration Rate

(2013) Andrew S. Levey et al.   ANNALS OF INTERNAL MEDICINE

Richness of human gut microbiome correlates with metabolic markers

(2013) Emmanuelle Le Chatelier et al.   NATURE

Dietary intervention impact on gut microbial gene richness

(2013) Aurélie Cotillard et al.   NATURE

Diet rapidly and reproducibly alters the human gut microbiome

(2013) Lawrence A. David et al.   NATURE

Phenol-Explorer 3.0: a major update of the Phenol-Explorer database to incorporate data on the effects of food processing on polyphenol content

(2013) J. A. Rothwell et al.   Database-The Journal of Biological Databases and Curation

Gut microbiota composition correlates with diet and health in the elderly

(2012) Marcus J. Claesson et al.   NATURE

Structure, function and diversity of the healthy human microbiome

(2012)   NATURE

Human gut microbiome viewed across age and geography

(2012) Tanya Yatsunenko et al.   NATURE

Dirichlet Multinomial Mixtures: Generative Models for Microbial Metagenomics

(2012) Ian Holmes et al.   PLoS One

Host-Gut Microbiota Metabolic Interactions

(2012) J. K. Nicholson et al.   SCIENCE

The Microbial-Mammalian Metabolic Axis: Beyond Simple Metabolism

(2011) Marc-Emmanuel Dumas   Cell Metabolism

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

(2011) G. D. Wu et al.   SCIENCE

A human gut microbial gene catalogue established by metagenomic sequencing

(2010) Junjie Qin et al.   NATURE

Statistical Recoupling Prior to Significance Testing in Nuclear Magnetic Resonance Based Metabonomics

(2009) Benjamin J. Blaise et al.   ANALYTICAL CHEMISTRY

Phenylpropanoid Biosynthesis

(2009) Thomas Vogt   Molecular Plant

Human metabolic phenotype diversity and its association with diet and blood pressure

(2008) Elaine Holmes et al.   NATURE

A core gut microbiome in obese and lean twins

(2008) Peter J. Turnbaugh et al.   NATURE