Predicting the postmortem interval of burial cadavers based on microbial community succession

Predicting postmortem interval based on microbial community sequences and machine learning algorithms

(2020) Ruina Liu et al.   ENVIRONMENTAL MICROBIOLOGY

The applicability of forensic time since death estimation methods for buried bodies in advanced decomposition stages

(2020) Stefan Pittner et al.   PLoS One

A eukaryotic community succession based method for postmortem interval (PMI) estimation of decomposing porcine remains

(2019) Luisa V. Forger et al.   FORENSIC SCIENCE INTERNATIONAL

The effects of death and post-mortem cold ischemia on human tissue transcriptomes

(2018) Pedro G. Ferreira et al.   Nature Communications

Compositional shifts in root-associated bacterial and archaeal microbiota track the plant life cycle in field-grown rice

(2018) Joseph A. Edwards et al.   PLOS BIOLOGY

Characterizing forensically important insect and microbial community colonization patterns in buried remains

(2018) Lavinia Iancu et al.   Scientific Reports

Estimating the postmortem interval using microbes: Knowledge gaps and a path to technology adoption

(2018) Jessica L. Metcalf   Forensic Science International-Genetics

Metabarcoding to investigate changes in soil microbial communities within forensic burial contexts

(2018) Noemi Procopio et al.   Forensic Science International-Genetics

Estimation of the late postmortem interval using FTIR spectroscopy and chemometrics in human skeletal remains

(2017) Qi Wang et al.   FORENSIC SCIENCE INTERNATIONAL

Altered Gut Microbiota in a Mouse Model of Alzheimer’s Disease

(2017) Ling Zhang et al.   JOURNAL OF ALZHEIMERS DISEASE

25 years of serving the community with ribosomal RNA gene reference databases and tools

(2017) Frank Oliver Glöckner et al.   JOURNAL OF BIOTECHNOLOGY

Postmortem succession of gut microbial communities in deceased human subjects

(2017) Jennifer M. DeBruyn et al.   PeerJ

Proteobacteria explain significant functional variability in the human gut microbiome

(2017) Patrick H. Bradley et al.   Microbiome

Effects of dispersal and selection on stochastic assembly in microbial communities

(2016) Sarah Evans et al.   ISME Journal

Human Thanatomicrobiome Succession and Time Since Death

(2016) Gulnaz T. Javan et al.   Scientific Reports

Microbial community assembly and metabolic function during mammalian corpse decomposition

(2015) J. L. Metcalf et al.   SCIENCE

mRIN for direct assessment of genome-wide and gene-specific mRNA integrity from large-scale RNA-sequencing data

(2015) Huijuan Feng et al.   Nature Communications

An evaluation of sampling methods used to produce insect growth models for postmortem interval estimation

(2014) Jeffrey D. Wells et al.   INTERNATIONAL JOURNAL OF LEGAL MEDICINE

Microbial communities associated with human decomposition and their potential use as postmortem clocks

(2014) Sheree J. Finley et al.   INTERNATIONAL JOURNAL OF LEGAL MEDICINE

Seasonal Variation of Carcass Decomposition and Gravesoil Chemistry in a Cold (Dfa) Climate

(2013) Jessica Meyer et al.   JOURNAL OF FORENSIC SCIENCES

A microbial clock provides an accurate estimate of the postmortem interval in a mouse model system

(2013) Jessica L Metcalf et al.   eLife

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

The ecological coherence of high bacterial taxonomic ranks

(2010) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

High-Throughput Sequencing and Metagenomics

(2009) William J. Jones   Estuaries and Coasts