Full-length transcriptome analysis of asparagus roots reveals the molecular mechanism of salt tolerance induced by arbuscular mycorrhizal fungi

Salt Tolerance Mechanisms of Plants

(2020) Eva van Zelm et al.   Annual Review of Plant Biology

Physiological and transcriptomic analyses reveal the mechanisms underlying the salt tolerance of Zoysia japonica Steud

(2020) Jingjing Wang et al.   BMC PLANT BIOLOGY

Autophagy and endocytosis – interconnections and interdependencies

(2020) Åsa B. Birgisdottir et al.   JOURNAL OF CELL SCIENCE

Comparative physiological mechanisms of arbuscular mycorrhizal fungi in mitigating salt-induced adverse effects on leaves and roots of Zelkova serrata

(2020) Jinping Wang et al.   MYCORRHIZA

Dynamic transcriptome and co-expression network analysis of the cotton (Gossypium hirsutum) root response to salinity stress at the seedling stage

(2020) Yongqiang Wang et al.   ACTA PHYSIOLOGIAE PLANTARUM

Alternative Splicing Enhances the Transcriptome Complexity of Liriodendron chinense

(2020) Zhonghua Tu et al.   Frontiers in Plant Science

Comparative transcriptome analysis reveals gene network regulating cadmium uptake and translocation in peanut roots under iron deficiency

(2019) Chu Chen et al.   BMC PLANT BIOLOGY

Analysis of Transcriptome and Epitranscriptome in Plants Using PacBio Iso-Seq and Nanopore-Based Direct RNA Sequencing

(2019) Liangzhen Zhao et al.   Frontiers in Genetics

Transcriptome analysis reveals the impact of arbuscular mycorrhizal symbiosis on Sesbania cannabina expose to high salinity

(2019) Cheng-Gang Ren et al.   Scientific Reports

Ectopic expression of SOD and APX genes in Arabidopsis alters metabolic pools and genes related to secondary cell wall cellulose biosynthesis and improve salt tolerance

(2019) Amrina Shafi et al.   MOLECULAR BIOLOGY REPORTS

Identification of transcription factors that regulate ATG8 expression and autophagy in Arabidopsis

(2019) Ping Wang et al.   Autophagy

Transcriptome Sequencing of Chickpea (Cicer arietinum L.) Genotypes for Identification of Drought-Responsive Genes Under Drought Stress Condition

(2019) Manoj Kumar et al.   PLANT MOLECULAR BIOLOGY REPORTER

Mitigation of Salinity Stress in Plants by Arbuscular Mycorrhizal Symbiosis: Current Understanding and New Challenges

(2019) Heikham Evelin et al.   Frontiers in Plant Science

Sodium transport by endocytic vesicles in cultured Arabidopsis thaliana (L.) Heynh. cells

(2019) Yuliya V. Orlova et al.   IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-PLANT

A transcription factor OsbHLH156 regulates Strategy II iron acquisition through localizing IRO2 to the nucleus in rice

(2019) Shoudong Wang et al.   NEW PHYTOLOGIST

Comparative transcriptome analysis of the garden asparagus (Asparagus officinalis L.) reveals the molecular mechanism for growth with arbuscular mycorrhizal fungi under salinity stress

(2019) Xuhong Zhang et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Transcriptomic and alternative splicing analyses reveal mechanisms of the difference in salt tolerance between barley and rice

(2019) Liangbo Fu et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

TPLATE Recruitment Reveals Endocytic Dynamics at Sites of Symbiotic Interface Assembly in Arbuscular Mycorrhizal Interactions

(2019) Giulia Russo et al.   Frontiers in Plant Science

Minimap2: pairwise alignment for nucleotide sequences

(2018) Heng Li   BIOINFORMATICS

RNA-seq analysis reveals alternative splicing under salt stress in cotton, Gossypium davidsonii

(2018) Guozhong Zhu et al.   BMC GENOMICS

High V-PPase activity is beneficial under high salt loads, but detrimental without salinity

(2018) Dorothea Graus et al.   NEW PHYTOLOGIST

Transcriptome analysis of sweet Sorghum inbred lines differing in salt tolerance provides novel insights into salt exclusion by roots

(2018) Zhen Yang et al.   PLANT AND SOIL

Transcriptome Analysis of Cucumber Roots Reveals Key Cold-Resistance Genes Induced by AM Fungi

(2018) Jun Ma et al.   PLANT MOLECULAR BIOLOGY REPORTER

Arbuscular Mycorrhizal Symbiosis Modulates Antioxidant Response and Ion Distribution in Salt-Stressed Elaeagnus angustifolia Seedlings

(2018) Wei Chang et al.   Frontiers in Microbiology

Arbuscular mycorrhizal fungi regulate the oxidative system, hormones and ionic equilibrium to trigger salt stress tolerance in Cucumis sativus L.

(2018) Abeer Hashem et al.   SAUDI JOURNAL OF BIOLOGICAL SCIENCES

Bacillus firmus (SW5) augments salt tolerance in soybean (Glycine max L.) by modulating root system architecture, antioxidant defense systems and stress-responsive genes expression

(2018) Mohamed A. El-Esawi et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

A Profusion of Molecular Scissors for Pectins: Classification, Expression, and Functions of Plant Polygalacturonases

(2018) Yang Yang et al.   Frontiers in Plant Science

Salinity tolerance and sodium localization in mycorrhizal strawberry plants

(2018) Shiam Ibna Haque et al.   COMMUNICATIONS IN SOIL SCIENCE AND PLANT ANALYSIS

Comparative transcriptome analysis of genes involved in the response of resistant and susceptible peach cultivars to water stress

(2018) Qi Wang et al.   SCIENTIA HORTICULTURAE

Increased cell wall thickness of endodermis and protoxylem in Aeluropus littorali s roots under salinity: The role of LAC4 and PER64 genes

(2017) Behrouz Barzegargolchini et al.   JOURNAL OF PLANT PHYSIOLOGY

Impact of two arbuscular mycorrhizal fungi on Arundo donax L. response to salt stress

(2017) Susanna Pollastri et al.   PLANTA

Arbuscular Mycorrhizal Symbiosis Alleviates Salt Stress in Black Locust through Improved Photosynthesis, Water Status, and K+/Na+ Homeostasis

(2017) Jie Chen et al.   Frontiers in Plant Science

Autophagy Is Rapidly Induced by Salt Stress and Is Required for Salt Tolerance in Arabidopsis

(2017) Liming Luo et al.   Frontiers in Plant Science

Salt stress induces internalization of plasma membrane aquaporin into the vacuole in Arabidopsis thaliana

(2016) Masamichi Ueda et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

iTAK: A Program for Genome-wide Prediction and Classification of Plant Transcription Factors, Transcriptional Regulators, and Protein Kinases

(2016) Yi Zheng et al.   Molecular Plant

Salinity-mediated transcriptional and post-translational regulation of the Arabidopsis aquaporin PIP2;7

(2016) Alicia Pou et al.   PLANT MOLECULAR BIOLOGY

The Interaction between Arbuscular Mycorrhizal Fungi and Endophytic Bacteria Enhances Plant Growth of Acacia gerrardii under Salt Stress

(2016) Abeer Hashem et al.   Frontiers in Microbiology

A Mechanism for Sustained Cellulose Synthesis during Salt Stress

(2015) Anne Endler et al.   CELL

Arbuscular mycorrhizal symbiosis ameliorates the optimum quantum yield of photosystem II and reduces non-photochemical quenching in rice plants subjected to salt stress

(2015) Rosa Porcel et al.   JOURNAL OF PLANT PHYSIOLOGY

Salinity tolerance of crops - what is the cost?

(2015) Rana Munns et al.   NEW PHYTOLOGIST

Transcriptome profiling of cold acclimation in bermudagrass (Cynodon dactylon)

(2015) Huisen Zhu et al.   SCIENTIA HORTICULTURAE

Molecular mechanisms governing Arabidopsis iron uptake

(2015) Tzvetina Brumbarova et al.   TRENDS IN PLANT SCIENCE

Genome-wide analysis of alternative splicing of pre-mRNA under salt stress in Arabidopsis

(2014) Feng Ding et al.   BMC GENOMICS

Effect of salinity stress on plants and its tolerance strategies: a review

(2014) Parul Parihar et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

New insights into plant salt acclimation: the roles of vesicle trafficking and reactive oxygen species signalling in mitochondria and the endomembrane system

(2014) Jesus Garcia de la Garma et al.   NEW PHYTOLOGIST

Identification and functional characterization of a sulfate transporter induced by both sulfur starvation and mycorrhiza formation inLotus japonicus

(2014) Marco Giovannetti et al.   NEW PHYTOLOGIST

Transcriptome analysis of rice root heterosis by RNA-Seq

(2013) Rongrong Zhai et al.   BMC GENOMICS

Protective effects of arbuscular mycorrhizal fungi on wheat (Triticum aestivum L.) plants exposed to salinity

(2013) Neveen B. Talaat et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

CPAT: Coding-Potential Assessment Tool using an alignment-free logistic regression model

(2013) Liguo Wang et al.   NUCLEIC ACIDS RESEARCH

Utilizing sequence intrinsic composition to classify protein-coding and long non-coding transcripts

(2013) Liang Sun et al.   NUCLEIC ACIDS RESEARCH

Pfam: the protein families database

(2013) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Molecular cloning, polyclonal antibody preparation, and characterization of a functional iron-related transcription factor IRO2 from Malus xiaojinensis

(2013) Lili Yin et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Regulation by arbuscular mycorrhizae of the integrated physiological response to salinity in plants: new challenges in physiological and molecular studies

(2012) J. M. Ruiz-Lozano et al.   JOURNAL OF EXPERIMENTAL BOTANY

Mechanisms associated with Fe-deficiency tolerance and signaling in shoots ofPisum sativum

(2012) Ahmad H. Kabir et al.   PHYSIOLOGIA PLANTARUM

Characterizing the role of rice NRAMP5 in Manganese, Iron and Cadmium Transport

(2012) Yasuhiro Ishimaru et al.   Scientific Reports

Clathrin-mediated endocytosis: the gateway into plant cells

(2011) Xu Chen et al.   CURRENT OPINION IN PLANT BIOLOGY

Soil processes affecting crop production in salt-affected soils

(2010) Pichu Rengasamy   FUNCTIONAL PLANT BIOLOGY

Alternative splicing and evolution: diversification, exon definition and function

(2010) Hadas Keren et al.   NATURE REVIEWS GENETICS

TRICHOME BIREFRINGENCE and Its Homolog AT5G01360 Encode Plant-Specific DUF231 Proteins Required for Cellulose Biosynthesis in Arabidopsis

(2010) V. Bischoff et al.   PLANT PHYSIOLOGY

Rhizosphere chemical dialogues: plant–microbe interactions

(2009) Dayakar V Badri et al.   CURRENT OPINION IN BIOTECHNOLOGY

Colonization with arbuscular mycorrhizal fungi improves salinity tolerance of tomato (Solanum lycopersicum L.) plants

(2009) Roghieh Hajiboland et al.   PLANT AND SOIL

Reactive oxygen species homeostasis and signalling during drought and salinity stresses

(2009) GAD MILLER et al.   PLANT CELL AND ENVIRONMENT

Mechanisms of Salinity Tolerance

(2008) Rana Munns et al.   Annual Review of Plant Biology

Arbuscular mycorrhiza: the mother of plant root endosymbioses

(2008) Martin Parniske   NATURE REVIEWS MICROBIOLOGY

Role of magnesium in carbon partitioning and alleviating photooxidative damage

(2008) Ismail Cakmak et al.   PHYSIOLOGIA PLANTARUM

Two Leucine-Rich Repeat Receptor Kinases Mediate Signaling, Linking Cell Wall Biosynthesis and ACC Synthase in Arabidopsis

(2008) S.-L. Xu et al.   PLANT CELL

Cell Wall Modifications in Arabidopsis Plants with Altered  -L-Arabinofuranosidase Activity

(2008) R. A. Chavez Montes et al.   PLANT PHYSIOLOGY