Genome-wide identification and expression analysis of the B-box transcription factor gene family in grapevine (Vitis vinifera L.)

Crosstalk amongst phytohormones from planta and PGPR under biotic and abiotic stresses

(2020) Naeem Khan et al.   PLANT GROWTH REGULATION

TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data

(2020) Chengjie Chen et al.   Molecular Plant

Characterization of B-BOX gene family and their expression profiles under hormonal, abiotic and metal stresses in Poaceae plants

(2019) Abdullah Shalmani et al.   BMC GENOMICS

B-box containing proteins BBX30 and BBX31, acting downstream of HY5, negatively regulate photomorphogenesis in Arabidopsis

(2019) Yueqin Heng et al.   PLANT PHYSIOLOGY

A B-box zinc finger protein, MdBBX10, enhanced salt and drought stresses tolerance in Arabidopsis

(2019) Xin Liu et al.   PLANT MOLECULAR BIOLOGY

Identification of the grape basic helix–loop–helix transcription factor family and characterization of expression patterns in response to different stresses

(2019) Min Gao et al.   PLANT GROWTH REGULATION

The B‐Box zinc finger protein MdBBX20 integrates anthocyanin accumulation in response to ultraviolet radiation and low temperature

(2019) Hongcheng Fang et al.   PLANT CELL AND ENVIRONMENT

BBX16, a B‐box protein, positively regulates light‐induced anthocyanin accumulation by activating MYB10 in red pear

(2019) Songling Bai et al.   PLANT BIOTECHNOLOGY JOURNAL

OsBBX14 promotes photomorphogenesis in rice by activating OsHY5L1 expression under blue light conditions

(2019) Bo Bai et al.   PLANT SCIENCE

GWAS Atlas: a curated resource of genome-wide variant-trait associations in plants and animals

(2019) Dongmei Tian et al.   NUCLEIC ACIDS RESEARCH

The grapevine homeobox gene VvHB58 influences seed and fruit development through multiple hormonal signaling pathways

(2019) Yunduan Li et al.   BMC PLANT BIOLOGY

Genome Identification of B-BOX Gene Family Members in Seven Rosacea Species and Their Expression Analysis in Response to Flower Induction in Malus domestica

(2018) Abdullah Shalmani et al.   MOLECULES

Evolutionary and expression analysis of Vitis vinifera OFP gene family

(2018) Li Wang et al.   PLANT SYSTEMATICS AND EVOLUTION

The heterologous expression of CmBBX22 delays leaf senescence and improves drought tolerance in Arabidopsis

(2018) Yanan Liu et al.   PLANT CELL REPORTS

The Pfam protein families database in 2019

(2018) Sara El-Gebali et al.   NUCLEIC ACIDS RESEARCH

The B-box bridge between light and hormones in plants

(2018) K.P. Vaishak et al.   JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY

Genome-wide identification and expression analysis of the B-box gene family in the Apple (Malus domestica Borkh.) genome

(2017) Xin Liu et al.   MOLECULAR GENETICS AND GENOMICS

20 years of the SMART protein domain annotation resource

(2017) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

The B-Box Domain Protein BBX21 Promotes Photomorphogenesis

(2017) Dongqing Xu et al.   PLANT PHYSIOLOGY

OsCOL16 , encoding a CONSTANS-like protein, represses flowering by up-regulating Ghd7 expression in rice

(2017) Weixun Wu et al.   PLANT SCIENCE

Genome-wide survey of B-box proteins in potato (Solanum tuberosum)—Identification, characterization and expression patterns during diurnal cycle, etiolation and de-etiolation

(2017) Urszula Talar et al.   PLoS One

Analysis of the grape (Vitis vinifera L.) thaumatin-like protein (TLP) gene family and demonstration that TLP29 contributes to disease resistance

(2017) Xiaoxiao Yan et al.   Scientific Reports

Transcriptome analyses of seed development in grape hybrids reveals a possible mechanism influencing seed size

(2016) Li Wang et al.   BMC GENOMICS

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

CDD/SPARCLE: functional classification of proteins via subfamily domain architectures

(2016) Aron Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

ArabidopsisB-BOX32 interacts with CONSTANS-LIKE3 to regulate flowering

(2016) Prateek Tripathi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-wide and molecular evolution analysis of the subtilase gene family in Vitis vinifera

(2015) Jun Cao et al.   BMC GENOMICS

GSDS 2.0: an upgraded gene feature visualization server

(2014) Bo Hu et al.   BIOINFORMATICS

The grapevine gene nomenclature system

(2014) Jérôme Grimplet et al.   BMC GENOMICS

CONSTANS is a photoperiod regulated activator of flowering in sorghum

(2014) Shanshan Yang et al.   BMC PLANT BIOLOGY

Evolution and expression analysis of the grape (Vitis vinifera L.) WRKY gene family

(2014) Chunlei Guo et al.   JOURNAL OF EXPERIMENTAL BOTANY

The CONSTANS-like 4 transcription factor, AtCOL4, positively regulates abiotic stress tolerance through an abscisic acid-dependent manner inArabidopsis

(2014) Ji-Hee Min et al.   Journal of Integrative Plant Biology

A Zinc Finger Protein Regulates Flowering Time and Abiotic Stress Tolerance in Chrysanthemum by Modulating Gibberellin Biosynthesis

(2014) Y. Yang et al.   PLANT CELL

The BBX family of plant transcription factors

(2014) Sreeramaiah N. Gangappa et al.   TRENDS IN PLANT SCIENCE

Convergence of Light and ABA Signaling on the ABI5 Promoter

(2014) Dongqing Xu et al.   PLoS Genetics

BBX proteins in green plants: Insights into their evolution, structure, feature and functional diversification

(2013) Carlos D. Crocco et al.   GENE

Effect of GA3 Treatment on Seed Development and Seed-Related Gene Expression in Grape

(2013) Chenxia Cheng et al.   PLoS One

MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity

(2012) Y. Wang et al.   NUCLEIC ACIDS RESEARCH

The Grapevine Expression Atlas Reveals a Deep Transcriptome Shift Driving the Entire Plant into a Maturation Program

(2012) M. Fasoli et al.   PLANT CELL

The Rice B-Box Zinc Finger Gene Family: Genomic Identification, Characterization, Expression Profiling and Diurnal Analysis

(2012) Jianyan Huang et al.   PLoS One

Arabidopsis circadian clock protein, TOC1, is a DNA-binding transcription factor

(2012) J. M. Gendron et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Divergence of duplicate genes in exon-intron structure

(2012) G. Xu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phytozome: a comparative platform for green plant genomics

(2011) David M. Goodstein et al.   NUCLEIC ACIDS RESEARCH

Functional characterisation of HvCO1, the barley (Hordeum vulgare) flowering time ortholog of CONSTANS

(2011) Chiara Campoli et al.   PLANT JOURNAL

Involvement of plant C2H2-type zinc finger transcription factors in stress responses

(2011) Agnieszka Kiełbowicz-Matuk   PLANT SCIENCE

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

The Arabidopsis B-Box Zinc Finger Family

(2009) R. Khanna et al.   PLANT CELL

VvCO and VvCOL1, two CONSTANS homologous genes, are regulated during flower induction and dormancy in grapevine buds

(2009) Rubén Almada et al.   PLANT CELL REPORTS