Exploiting heterologous and endogenous CRISPR‐Cas systems for genome editing in the probiotic Clostridium butyricum

Enhancing plasmid transformation efficiency and enabling CRISPR‐Cas9/Cpf1‐based genome editing in Clostridium tyrobutyricum

(2020) Jie Zhang et al.   BIOTECHNOLOGY AND BIOENGINEERING

Efficiency enhancement of H2 production by a newly isolated maltose-preferring fermentative bio-hydrogen producer of Clostridium butyricum NH-02

(2020) Yuqi Wang et al.   Journal of Energy Storage

The impact of probiotic Clostridium butyricum MIYAIRI 588 on murine gut metabolic alterations

(2019) Mao Hagihara et al.   JOURNAL OF INFECTION AND CHEMOTHERAPY

Improving the non-sterile food waste bioconversion to hydrogen by microwave pretreatment and bioaugmentation with Clostridium butyricum

(2019) Joana Ortigueira et al.   WASTE MANAGEMENT

Granular activated carbon supplementation alters the metabolic flux of Clostridium butyricum for enhanced biohydrogen production

(2019) Jeong-Hoon Park et al.   BIORESOURCE TECHNOLOGY

A novel isolate of Clostridium butyricum for efficient butyric acid production by xylose fermentation

(2018) Xin Wang et al.   ANNALS OF MICROBIOLOGY

Genome engineering of Clostridium difficile using the CRISPR-Cas9 system

(2018) S. Wang et al.   CLINICAL MICROBIOLOGY AND INFECTION

Exploiting endogenous CRISPR-Cas system for multiplex genome editing in Clostridium tyrobutyricum and engineer the strain for high-level butanol production

(2018) Jie Zhang et al.   METABOLIC ENGINEERING

Establishment of an Endogenous Clostridium difficile Rat Infection Model and Evaluation of the Effects of Clostridium butyricum MIYAIRI 588 Probiotic Strain

(2018) Kentaro Oka et al.   Frontiers in Microbiology

In Silico Processing of the Complete CRISPR-Cas Spacer Space for Identification of PAM Sequences

(2018) Brian J. Mendoza et al.   Biotechnology Journal

Oral administration of Clostridium butyricum CGMCC0313-1 inhibits β-lactoglobulin-induced intestinal anaphylaxis in a mouse model of food allergy

(2017) Juan Zhang et al.   Gut Pathogens

Extending CRISPR-Cas9 Technology from Genome Editing to Transcriptional Engineering in the Genus Clostridium

(2016) Mark R. Bruder et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Clostridium butyricum : from beneficial to a new emerging pathogen

(2016) N. Cassir et al.   CLINICAL MICROBIOLOGY AND INFECTION

Applications of CRISPR technologies in research and beyond

(2016) Rodolphe Barrangou et al.   NATURE BIOTECHNOLOGY

Bacterial Genome Editing with CRISPR-Cas9: Deletion, Integration, Single Nucleotide Modification, and Desirable “Clean” Mutant Selection in Clostridium beijerinckii as an Example

(2016) Yi Wang et al.   ACS Synthetic Biology

CRISPR/Cas9-Based Efficient Genome Editing in Clostridium ljungdahlii, an Autotrophic Gas-Fermenting Bacterium

(2016) He Huang et al.   ACS Synthetic Biology

Sequence features associated with the cleavage efficiency of CRISPR/Cas9 system

(2016) Xiaoxi Liu et al.   Scientific Reports

Harnessing heterologous and endogenous CRISPR-Cas machineries for efficient markerless genome editing in Clostridium

(2016) Michael E. Pyne et al.   Scientific Reports

The functional dlt operon of Clostridium butyricum controls the d-alanylation of cell wall components and influences cell septation and vancomycin-induced lysis

(2015) Sandra Wydau-Dematteis et al.   ANAEROBE

Current and future prospects for CRISPR-based tools in bacteria

(2015) Michelle L. Luo et al.   BIOTECHNOLOGY AND BIOENGINEERING

A novel arabinose-inducible genetic operation system developed for Clostridium cellulolyticum

(2015) Jie Zhang et al.   Biotechnology for Biofuels

Smad2 and Smad3 Inversely Regulate TGF-β Autoinduction in Clostridium butyricum-Activated Dendritic Cells

(2015) Ikkou Kashiwagi et al.   IMMUNITY

Markerless chromosomal gene deletion in Clostridium beijerinckii using CRISPR/Cas9 system

(2015) Yi Wang et al.   JOURNAL OF BIOTECHNOLOGY

Characterization and evolution of Salmonella CRISPR-Cas systems

(2015)   MICROBIOLOGY-SGM

Harnessing Type I and Type III CRISPR-Cas systems for genome editing

(2015) Yingjun Li et al.   NUCLEIC ACIDS RESEARCH

Technical guide for genetic advancement of underdeveloped and intractable Clostridium

(2014) Michael E. Pyne et al.   BIOTECHNOLOGY ADVANCES

Rational design of highly active sgRNAs for CRISPR-Cas9–mediated gene inactivation

(2014) John G Doench et al.   NATURE BIOTECHNOLOGY

Unravelling the structural and mechanistic basis of CRISPR–Cas systems

(2014) John van der Oost et al.   NATURE REVIEWS MICROBIOLOGY

CRISPR–Cas systems: beyond adaptive immunity

(2014) Edze R. Westra et al.   NATURE REVIEWS MICROBIOLOGY

Protospacer recognition motifs

(2013) Shiraz A. Shah et al.   RNA Biology

A genetic and metabolic approach to redirection of biochemical pathways ofClostridium butyricumfor enhancing hydrogen production

(2012) Guiqin Cai et al.   BIOTECHNOLOGY AND BIOENGINEERING

A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial Immunity

(2012) M. Jinek et al.   SCIENCE

Effects of different replicons in conjugative plasmids on transformation efficiency, plasmid stability, gene expression and n-butanol biosynthesis in Clostridium tyrobutyricum

(2011) Mingrui Yu et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Genetic manipulation of butyrate formation pathways in Clostridium butyricum

(2011) Guiqin Cai et al.   JOURNAL OF BIOTECHNOLOGY

Antimicrobial susceptibility and resistance determinants of Clostridium butyricum isolates from preterm infants

(2010) Laurent Ferraris et al.   INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS

A modular system for Clostridium shuttle plasmids

(2009) John T. Heap et al.   JOURNAL OF MICROBIOLOGICAL METHODS

The ClosTron: Mutagenesis in Clostridium refined and streamlined

(2009) John T. Heap et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Short motif sequences determine the targets of the prokaryotic CRISPR defence system

(2009)   MICROBIOLOGY-SGM