The histone methyltransferases Set5 and Set1 have overlapping functions in gene silencing and telomere maintenance

The Chromatin and Transcriptional Landscape of Native Saccharomyces cerevisiae Telomeres and Subtelomeric Domains

(2015) Aisha Ellahi et al.   GENETICS

Orchestrating high-throughput genomic analysis with Bioconductor

(2015) Wolfgang Huber et al.   NATURE METHODS

limma powers differential expression analyses for RNA-sequencing and microarray studies

(2015) Matthew E. Ritchie et al.   NUCLEIC ACIDS RESEARCH

The Chromatin and Transcriptional Landscape of Native Saccharomyces cerevisiae Telomeres and Subtelomeric Domains

(2015) Aisha Ellahi et al.   GENETICS

Large-Scale Genetic Perturbations Reveal Regulatory Networks and an Abundance of Gene-Specific Repressors

(2014) Patrick Kemmeren et al.   CELL

Set5 and Set1 cooperate to repress gene expression at telomeres and retrotransposons

(2014) Glòria Mas Martín et al.   Epigenetics

Epigenetics of Aging and Aging-related Disease

(2014) A. Brunet et al.   JOURNALS OF GERONTOLOGY SERIES A-BIOLOGICAL SCIENCES AND MEDICAL SCIENCES

The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance

(2014) Charles Wang et al.   NATURE BIOTECHNOLOGY

Multifaceted Genome Control by Set1 Dependent and Independent of H3K4 Methylation and the Set1C/COMPASS Complex

(2014) Irina V. Mikheyeva et al.   PLoS Genetics

voom: precision weights unlock linear model analysis tools for RNA-seq read counts

(2014) Charity W Law et al.   GENOME BIOLOGY

The Hallmarks of Aging

(2013) Carlos López-Otín et al.   CELL

Spp1 at the crossroads of H3K4me3 regulation and meiotic recombination

(2013) Laurent Acquaviva et al.   Epigenetics

Genome-wide analysis of functional sirtuin chromatin targets in yeast

(2013) Mingguang Li et al.   GENOME BIOLOGY

Saccharomyces cerevisiae as a Model to Study Replicative Senescence Triggered by Telomere Shortening

(2013) M. Teresa Teixeira   Frontiers in Oncology

Smyd3 regulates cancer cell phenotypes and catalyzes histone H4 lysine 5 methylation

(2012) Glenn S. Van Aller et al.   Epigenetics

Telomere dysfunction and genome instability

(2012) Cristina Frias   Frontiers in Bioscience-Landmark

Methylation of H4 lysines 5, 8 and 12 by yeast Set5 calibrates chromatin stress responses

(2012) Erin M Green et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Deregulated telomere transcription causes replication-dependent telomere shortening and promotes cellular senescence

(2012) André Maicher et al.   NUCLEIC ACIDS RESEARCH

Two Distinct Repressive Mechanisms for Histone 3 Lysine 4 Methylation through Promoting 3′-End Antisense Transcription

(2012) Thanasis Margaritis et al.   PLoS Genetics

New marks on the block

(2012) Erin M. Green et al.   Nucleus

Histone H2B ubiquitylation and H3 lysine 4 methylation prevent ectopic silencing of euchromatic loci important for the cellular response to heat

(2011) Amy Leung et al.   MOLECULAR BIOLOGY OF THE CELL

Dot1 and Histone H3K79 Methylation in Natural Telomeric and HM Silencing

(2011) Yoh-Hei Takahashi et al.   MOLECULAR CELL

A Common Telomeric Gene Silencing Assay Is Affected by Nucleotide Metabolism

(2011) Marlies P. Rossmann et al.   MOLECULAR CELL

Histone H4 Lysine 12 Acetylation Regulates Telomeric Heterochromatin Plasticity in Saccharomyces cerevisiae

(2011) Bo O. Zhou et al.   PLoS Genetics

A Genetic and Structural Study of Genome Rearrangements Mediated by High Copy Repeat Ty1 Elements

(2011) Jason E. Chan et al.   PLoS Genetics

Fluctuation AnaLysis CalculatOR: a web tool for the determination of mutation rate using Luria-Delbruck fluctuation analysis

(2009) B. M. Hall et al.   BIOINFORMATICS

Validation of reference genes for quantitative expression analysis by real-time RT-PCR in Saccharomyces cerevisiae

(2009) Marie-Ange Teste et al.   BMC MOLECULAR BIOLOGY

Dimethylation of H3K4 by Set1 Recruits the Set3 Histone Deacetylase Complex to 5′ Transcribed Regions

(2009) TaeSoo Kim et al.   CELL

Inactivation of the Sas2 histone acetyltransferase delays senescence driven by telomere dysfunction

(2009) Marina L Kozak et al.   EMBO JOURNAL

P-Body Components Are Required for Ty1 Retrotransposition during Assembly of Retrotransposition-Competent Virus-Like Particles

(2009) M. A. Checkley et al.   MOLECULAR AND CELLULAR BIOLOGY

Histone deacetylase Rpd3 antagonizes Sir2-dependent silent chromatin propagation

(2009) Jing Zhou et al.   NUCLEIC ACIDS RESEARCH

Repressive and non-repressive chromatin at native telomeres in Saccharomyces cerevisiae

(2009) Esther R Loney et al.   Epigenetics & Chromatin

A cryptic unstable transcript mediates transcriptional trans-silencing of the Ty1 retrotransposon in S. cerevisiae

(2008) J. Berretta et al.   GENES & DEVELOPMENT

Chromatin-Associated Genes Protect the Yeast Genome From Ty1 Insertional Mutagenesis

(2008) Katherine M. Nyswaner et al.   GENETICS