Polyphasic analysis of an Azoarcus-Leptothrix-dominated bacterial biofilm developed on stainless steel surface in a gasoline-contaminated hypoxic groundwater

Microbial Toluene Removal in Hypoxic Model Constructed Wetlands Occurs Predominantly via the Ring Monooxygenation Pathway

(2015) P. M. Martínez-Lavanchy et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Zoogloea oleivorans sp. nov., a floc-forming, petroleum hydrocarbon-degrading bacterium isolated from biofilm

(2014) M. Farkas et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Structure and microbial diversity of biofilms on different pipe materials of a model drinking water distribution systems

(2014) Agnieszka Rożej et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Path2Models: large-scale generation of computational models from biochemical pathway maps

(2013) Finja Büchel et al.   BMC Systems Biology

Azoarcus olearius sp. nov., a nitrogen-fixing bacterium isolated from oil-contaminated soil

(2013) M.-H. Chen et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Diversity of Planktonic and Attached Bacterial Communities in a Phenol-Contaminated Sandstone Aquifer

(2013) Athanasios Rizoulis et al.   MICROBIAL ECOLOGY

Analysis of Hydrocarbon-Contaminated Groundwater Metagenomes as Revealed by High-Throughput Sequencing

(2013) Nathlee S. Abbai et al.   MOLECULAR BIOTECHNOLOGY

The genome portal of the Department of Energy Joint Genome Institute: 2014 updates

(2013) Henrik Nordberg et al.   NUCLEIC ACIDS RESEARCH

One-year monitoring of meta-cleavage dioxygenase gene expression and microbial community dynamics reveals the relevance of subfamily I.2.C extradiol dioxygenases in hypoxic, BTEX-contaminated groundwater

(2013) András Táncsics et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Analysis of biofilm bacterial communities responsible for carbon removal through a reactor cascade treating wastewater

(2013) Tibor Benedek et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Enhanced Gene Detection Assays for Fumarate-Adding Enzymes Allow Uncovering of Anaerobic Hydrocarbon Degraders in Terrestrial and Marine Systems

(2012) Frederick von Netzer et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metagenome analyses of corroded concrete wastewater pipe biofilms reveal a complex microbial system

(2012) Vicente Gomez-Alvarez et al.   BMC MICROBIOLOGY

Groundwater Biofilm Dynamics Grown In Situ Along a Nutrient Gradient

(2012) Wendy M. Williamson et al.   Groundwater

Hydrothermal ecotones and streamer biofilm communities in the Lower Geyser Basin, Yellowstone National Park

(2011) D'Arcy R Meyer-Dombard et al.   ENVIRONMENTAL MICROBIOLOGY

Betaproteobacteria dominance and diversity shifts in the bacterial community of a PAH-contaminated soil exposed to phenanthrene

(2011) Florence Martin et al.   ENVIRONMENTAL POLLUTION

Quantification of Subfamily I.2.C Catechol 2,3-Dioxygenase mRNA Transcripts in Groundwater Samples of an Oxygen-Limited BTEX-Contaminated Site

(2011) András Táncsics et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species

(2011) O.-S. Kim et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

The Marine Isolate Novosphingobium sp. PP1Y Shows Specific Adaptation to Use the Aromatic Fraction of Fuels as the Sole Carbon and Energy Source

(2011) Eugenio Notomista et al.   MICROBIAL ECOLOGY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Degradation of a benzene–toluene mixture by hydrocarbon-adapted bacterial communities

(2010) Arturo Aburto et al.   ANNALS OF MICROBIOLOGY

Community Structure of Subsurface Biofilms in the Thermal Sulfidic Caves of Acquasanta Terme, Italy

(2010) D. S. Jones et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Subsurface Cycling of Nitrogen and Anaerobic Aromatic Hydrocarbon Biodegradation Revealed by Nucleic Acid and Metabolic Biomarkers

(2010) J. M. Yagi et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metagenomic insights into evolution of a heavy metal-contaminated groundwater microbial community

(2010) Christopher L Hemme et al.   ISME Journal

Degradation of BTEX by anaerobic bacteria: physiology and application

(2010) Sander A. B. Weelink et al.   REVIEWS IN ENVIRONMENTAL SCIENCE AND BIO-TECHNOLOGY

Investigation of catechol 2,3-dioxygenase and 16S rRNA gene diversity in hypoxic, petroleum hydrocarbon contaminated groundwater

(2010) András Táncsics et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Metagenomics reveals diversity and abundance ofmeta-cleavage pathways in microbial communities from soil highly contaminated with jet fuel under air-sparging bioremediation

(2009) Maria V. Brennerova et al.   ENVIRONMENTAL MICROBIOLOGY

Albidoferax, a new genus of Comamonadaceae and reclassification of Rhodoferax ferrireducens (Finneran et al., 2003) as Albidoferax ferrireducens comb. nov.

(2009) Chintalapati Venkata Ramana et al.   JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

Mixed aerobic and anaerobic microbial communities in benzene-contaminated groundwater

(2008) A. Aburto et al.   JOURNAL OF APPLIED MICROBIOLOGY