4.7 Article

Mutations of Intrinsically Disordered Protein Regions Can Drive Cancer but Lack Therapeutic Strategies

Journal

BIOMOLECULES
Volume 11, Issue 3, Pages -

Publisher

MDPI
DOI: 10.3390/biom11030381

Keywords

intrinsically disordered regions; protein modules; short linear motifs; molecular switches; cancer genomics; driver gene identification; cancer hallmarks; drug targets

Funding

  1. Lendulet grant from the Hungarian Academy of Sciences [LP2014-18]
  2. OTKA [K108798, K129164]
  3. National Research, Development and Innovation office of Hungary [PD-120973]
  4. EMBO|EuropaBio fellowship [7544]

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Intrinsically disordered protein regions play important roles in regulatory networks and are associated with cancer. Computational analysis revealed that around 20% of cancer drivers target disordered regions, functioning in distinct ways from ordered drivers and being enriched in specific biological processes. Mutations in disordered drivers represent key events in cancer patients, highlighting the need for novel therapeutic options.
Many proteins contain intrinsically disordered regions (IDRs) which carry out important functions without relying on a single well-defined conformation. IDRs are increasingly recognized as critical elements of regulatory networks and have been also associated with cancer. However, it is unknown whether mutations targeting IDRs represent a distinct class of driver events associated with specific molecular and system-level properties, cancer types and treatment options. Here, we used an integrative computational approach to explore the direct role of intrinsically disordered protein regions driving cancer. We showed that around 20% of cancer drivers are primarily targeted through a disordered region. These IDRs can function in multiple ways which are distinct from the functional mechanisms of ordered drivers. Disordered drivers play a central role in context-dependent interaction networks and are enriched in specific biological processes such as transcription, gene expression regulation and protein degradation. Furthermore, their modulation represents an alternative mechanism for the emergence of all known cancer hallmarks. Importantly, in certain cancer patients, mutations of disordered drivers represent key driving events. However, treatment options for such patients are currently severely limited. The presented study highlights a largely overlooked class of cancer drivers associated with specific cancer types that need novel therapeutic options.

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