Comparative Genomic Analysis of Lactiplantibacillus plantarum Isolated from Different Niches

Using average nucleotide identity to improve taxonomic assignments in prokaryotic genomes at the NCBI

(2018) Stacy Ciufo et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Comparative Genomics of the Herbivore Gut Symbiont Lactobacillus reuteri Reveals Genetic Diversity and Lifestyle Adaptation

(2018) Jie Yu et al.   Frontiers in Microbiology

Comparative genomics analysis of five Psychrobacter strains isolated from world-wide habitats reveal high intra-genus variations

(2017) Shan Zhang et al.   EXTREMOPHILES

Modular pathway engineering of Corynebacterium glutamicum to improve xylose utilization and succinate production

(2017) Suah Jo et al.   JOURNAL OF BIOTECHNOLOGY

Comparative genomics of Lactobacillus salivarius strains focusing on their host adaptation

(2017) Jun-Yeong Lee et al.   MICROBIOLOGICAL RESEARCH

Expert consensus document: The International Scientific Association for Probiotics and Prebiotics (ISAPP) consensus statement on the definition and scope of prebiotics

(2017) Glenn R. Gibson et al.   Nature Reviews Gastroenterology & Hepatology

Nomadic lifestyle of Lactobacillus plantarum revealed by comparative genomics of 54 strains isolated from different habitats

(2016) Maria Elena Martino et al.   ENVIRONMENTAL MICROBIOLOGY

Selection of Taste Markers Related to Lactic Acid Bacteria Microflora Metabolism for Chinese Traditional Paocai: A Gas Chromatography–Mass Spectrometry-Based Metabolomics Approach

(2016) Nan Zhao et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Comparative Analysis of the Complete Genome of Lactobacillus plantarum GB-LP2 and Potential Candidate Genes for Host Immune System Enhancement

(2016) Woori Kwak et al.   JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY

Complete genome sequences and comparative genome analysis of Lactobacillus plantarum strain 5-2 isolated from fermented soybean

(2015) Chen-Jian Liu et al.   GENOMICS

In vitro fermentation of fructooligosaccharides with human gut bacteria

(2015) Bingyong Mao et al.   Food & Function

Erratum: SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

(2015) Ruibang Luo et al.   GigaScience

Comparative genomics of unintrogressed Campylobacter coli clades 2 and 3

(2014) Caroline PA Skarp-de Haan et al.   BMC GENOMICS

In Vitro Fermentation of Lactulose by Human Gut Bacteria

(2014) Bingyong Mao et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

A Comparative Pan-Genome Perspective of Niche-Adaptable Cell-Surface Protein Phenotypes in Lactobacillus rhamnosus

(2014) Ravi Kant et al.   PLoS One

Salmonella Utilizes D-Glucosaminate via a Mannose Family Phosphotransferase System Permease and Associated Enzymes

(2013) K. A. Miller et al.   JOURNAL OF BACTERIOLOGY

Challenges in homology search: HMMER3 and convergent evolution of coiled-coil regions

(2013) Jaina Mistry et al.   NUCLEIC ACIDS RESEARCH

The carbohydrate-active enzymes database (CAZy) in 2013

(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

Comparative Genomic and Functional Analysis of 100 Lactobacillus rhamnosus Strains and Their Comparison with Strain GG

(2013) François P. Douillard et al.   PLoS Genetics

Genome Sequence of the Naturally Plasmid-Free Lactobacillus plantarum Strain NC8 (CCUG 61730)

(2012) L. Axelsson et al.   JOURNAL OF BACTERIOLOGY

dbCAN: a web resource for automated carbohydrate-active enzyme annotation

(2012) Yanbin Yin et al.   NUCLEIC ACIDS RESEARCH

SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

(2012) Ruibang Luo et al.   GigaScience

PGAP: pan-genomes analysis pipeline

(2011) Yongbing Zhao et al.   BIOINFORMATICS

Effect of Lactobacillus plantarum isolated from digestive tract of wild shrimp on growth and survival of white shrimp (Litopenaeus vannamei) challenged with Vibrio harveyi

(2011) Khanitta Kongnum et al.   FISH & SHELLFISH IMMUNOLOGY

Complete Resequencing and Reannotation of the Lactobacillus plantarum WCFS1 Genome

(2011) R. J. Siezen et al.   JOURNAL OF BACTERIOLOGY

Genomic diversity and versatility of Lactobacillus plantarum, a natural metabolic engineer

(2011) Roland J Siezen et al.   Microbial Cell Factories

Patterns of kinesin evolution reveal a complex ancestral eukaryote with a multifunctional cytoskeleton

(2010) Bill Wickstead et al.   BMC EVOLUTIONARY BIOLOGY

Complete Genome Sequence of the Probiotic Lactobacillus plantarum ST-III

(2010) Y. Wang et al.   JOURNAL OF BACTERIOLOGY

Phenotypic and genomic diversity ofLactobacillus plantarumstrains isolated from various environmental niches

(2009) Roland J. Siezen et al.   ENVIRONMENTAL MICROBIOLOGY

ORIGINAL ARTICLE: Application of soybean meal, soy protein concentrate and isolate differing in α-galactosides content to low- and high-fibre diets in growing turkeys

(2009) Z. Zduńczyk et al.   JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION

Isolation and partial characterization of novel genes encoding acidic cellulases from metagenomes of buffalo rumens

(2009) C.-J. Duan et al.   JOURNAL OF APPLIED MICROBIOLOGY

Shifting the genomic gold standard for the prokaryotic species definition

(2009) Michael Richter et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA