Temporal Dynamics of Cloacal Microbiota in Adult Laying Chickens With and Without Access to an Outdoor Range

Cloacal Swabs Are Unreliable Sources for Estimating Lower Gastro-Intestinal Tract Microbiota Membership and Structure in Broiler Chickens

(2020) Travis Williams et al.   Microorganisms

Associations between phenotypic characteristics and clinical parameters of broilers and intestinal microbial development throughout a production cycle: A field study

(2020) Jannigje G. Kers et al.   MicrobiologyOpen

Patterns of community assembly in the developing chicken microbiome reveal rapid primary succession

(2019) Stephanie D. Jurburg et al.   MicrobiologyOpen

Farm stage, bird age and body site dominantly affect the quantity, taxonomic composition, and dynamics of respiratory and gut microbiota of commercial layer chickens

(2019) John M. Ngunjiri et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Primate microbiomes over time: Longitudinal answers to standing questions in microbiome research

(2019) Johannes R. Björk et al.   AMERICAN JOURNAL OF PRIMATOLOGY

Development of the Caecal Microbiota in Three Broiler Breeds

(2019) Peter Richards et al.   Frontiers in Veterinary Science

Limited changes in the fecal microbiome composition of laying hens after oral inoculation with wild duck feces

(2019) Janneke Schreuder et al.   POULTRY SCIENCE

The Role of Housing Environment and Dietary Protein Source on the Gut Microbiota of Chicken

(2019) Shawna Marie Hubert et al.   Animals

Do laying hens eat and forage in excreta from other hens?

(2018) C. G. von Waldburg-Zeil et al.   Animal

Host and Environmental Factors Affecting the Intestinal Microbiota in Chickens

(2018) Jannigje G. Kers et al.   Frontiers in Microbiology

Free Dietary Choice and Free-Range Rearing Improve the Product Quality, Gait Score, and Microbial Richness of Chickens

(2018) Siyu Chen et al.   Animals

The effect of microbiome modulation on the intestinal health of poultry

(2018) Michael H. Kogut   ANIMAL FEED SCIENCE AND TECHNOLOGY

Measuring the gut microbiome in birds: Comparison of faecal and cloacal sampling

(2017) Elin Videvall et al.   Molecular Ecology Resources

The resilience of the intestinal microbiota influences health and disease

(2017) Felix Sommer et al.   NATURE REVIEWS MICROBIOLOGY

Different antibiotic growth promoters induce specific changes in the cecal microbiota membership of broiler chicken

(2017) Marcio C. Costa et al.   PLoS One

High-throughput sequencing technology to reveal the composition and function of cecal microbiota in Dagu chicken

(2016) Yunhe Xu et al.   BMC MICROBIOLOGY

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Differences in host breed and diet influence colonization by Campylobacter jejuni and induction of local immune responses in chicken

(2016) Zifeng Han et al.   Gut Pathogens

Important Metabolic Pathways and Biological Processes Expressed by Chicken Cecal Microbiota

(2015) Ondrej Polansky et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Early life microbial colonization of the gut and intestinal development differ between genetically divergent broiler lines

(2015) Dirkjan Schokker et al.   BMC GENOMICS

Comparison of fecal and cecal microbiotas reveals qualitative similarities but quantitative differences

(2015) Dragana Stanley et al.   BMC MICROBIOLOGY

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

A review on prebiotics and probiotics for the control of dysbiosis: present status and future perspectives

(2014) R. Ducatelle et al.   Animal

Use of outdoor ranges by laying hens in different sized flocks

(2014) Sabine G. Gebhardt-Henrich et al.   APPLIED ANIMAL BEHAVIOUR SCIENCE

Successional changes in the chicken cecal microbiome during 42 days of growth are independent of organic acid feed additives

(2014) Brian B Oakley et al.   BMC Veterinary Research

Succession and Replacement of Bacterial Populations in the Caecum of Egg Laying Hens over Their Whole Life

(2014) Petra Videnska et al.   PLoS One

The dynamics of a family’s gut microbiota reveal variations on a theme

(2014) Patrick D Schloss et al.   Microbiome

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Cohabiting family members share microbiota with one another and with their dogs

(2013) Se Jin Song et al.   eLife

Intestinal colonization resistance

(2012) Trevor D. Lawley et al.   IMMUNOLOGY

Diversity, stability and resilience of the human gut microbiota

(2012) Catherine A. Lozupone et al.   NATURE

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

FORWARD SELECTION OF EXPLANATORY VARIABLES

(2008) F. Guillaume Blanchet et al.   ECOLOGY

Factors Affecting Intestinal Health in Poultry

(2008) M. Yegani et al.   POULTRY SCIENCE