Adaptive dating and fast proposals: Revisiting the phylogenetic relaxed clock model

The first two cases of 2019‐nCoV in Italy: Where they come from?

(2020) Marta Giovanetti et al.   JOURNAL OF MEDICAL VIROLOGY

Improving the performance of Bayesian phylogenetic inference under relaxed clock models

(2020) Rong Zhang et al.   BMC EVOLUTIONARY BIOLOGY

BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis

(2019) Remco Bouckaert et al.   PLoS Computational Biology

Blocking borehole conductivity logs at the resolution of above-ground electromagnetic systems

(2019) Aaron Davis et al.   GEOPHYSICS

Phylogenomics resolves the deep phylogeny of seed plants and indicates partial convergent or homoplastic evolution between Gnetales and angiosperms

(2018) Jin-Hua Ran et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Establishment and cryptic transmission of Zika virus in Brazil and the Americas

(2017) N. R. Faria et al.   NATURE

RevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language

(2016) Sebastian Höhna et al.   SYSTEMATIC BIOLOGY

Tectonic collision and uplift of Wallacea triggered the global songbird radiation

(2016) Robert G. Moyle et al.   Nature Communications

Convergent evolution of morphology and habitat use in the explosive Hawaiian fancy case caterpillar radiation

(2013) A. Y. Kawahara et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Searching for efficient Markov chain Monte Carlo proposal kernels

(2013) Z. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phylogeny and systematics of the bee genusOsmia(Hymenoptera: Megachilidae) with emphasis on North AmericanMelanosmia: subgenera, synonymies and nesting biology revisited

(2013) MOLLY G. RIGHTMYER et al.   SYSTEMATIC ENTOMOLOGY

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

Molecular phylogenetics of squirrelfishes and soldierfishes (Teleostei: Beryciformes: Holocentridae): Reconciling more than 100 years of taxonomic confusion

(2012) Alex Dornburg et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Model Averaging and Bayes Factor Calculation of Relaxed Molecular Clocks in Bayesian Phylogenetics

(2011) W. L. S. Li et al.   MOLECULAR BIOLOGY AND EVOLUTION

Robust adaptive Metropolis algorithm with coerced acceptance rate

(2011) Matti Vihola   STATISTICS AND COMPUTING

Testing the Impact of Calibration on Molecular Divergence Times Using a Fossil-Rich Group: The Case of Nothofagus (Fagales)

(2011) Hervé Sauquet et al.   SYSTEMATIC BIOLOGY

Guided Tree Topology Proposals for Bayesian Phylogenetic Inference

(2011) Sebastian Höhna et al.   SYSTEMATIC BIOLOGY

BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics

(2011) Daniel L. Ayres et al.   SYSTEMATIC BIOLOGY

Bayesian random local clocks, or one rate to rule them all

(2010) Alexei J Drummond et al.   BMC BIOLOGY

Effective population size and the rate and pattern of nucleotide substitutions

(2009) M. Woolfit   Biology Letters

Optimization of DNA polymerase mutation rates during bacterial evolution

(2009) E. Loh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Efficiency of Markov Chain Monte Carlo Tree Proposals in Bayesian Phylogenetics

(2008) Clemens Lakner et al.   SYSTEMATIC BIOLOGY