Comparison of DNA sequencing and morphological identification techniques to characterize environmental fungal communities
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Comparison of DNA sequencing and morphological identification techniques to characterize environmental fungal communities
Authors
Keywords
-
Journal
Scientific Reports
Volume 11, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2021-01-29
DOI
10.1038/s41598-021-81996-w
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- First successful isolation of Entoloma clypeatum species complex from basidiospores
- (2019) Manami Shishikura et al. MYCOSCIENCE
- Radiocesium concentration in indoor air during residential house cleaning in Fukushima Dai-ichi nuclear power plant evacuation areas
- (2019) Naohide Shinohara et al. JOURNAL OF ENVIRONMENTAL RADIOACTIVITY
- Radiocesium contamination in house dust within evacuation areas close to the Fukushima Daiichi nuclear power plant
- (2018) Naohide Shinohara et al. ENVIRONMENT INTERNATIONAL
- Characterization of fungi in office dust: Comparing results of microbial secondary metabolites, fungal internal transcribed spacer region sequencing, viable culture and other microbial indices
- (2018) J.-H. Park et al. INDOOR AIR
- Taxonomic diversity of fungi deposited from the atmosphere
- (2018) Cheolwoon Woo et al. ISME Journal
- The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update
- (2018) Enis Afgan et al. NUCLEIC ACIDS RESEARCH
- Genome-based estimates of fungal rDNA copy number variation across phylogenetic scales and ecological lifestyles
- (2018) Lotus A. Lofgren et al. MOLECULAR ECOLOGY
- Phylogeny of xerophilic aspergilli (subgenus Aspergillus ) and taxonomic revision of section Restricti
- (2017) F. Sklenář et al. STUDIES IN MYCOLOGY
- Observation-based metrics for residential dampness and mold with dose-response relationships to health: A review
- (2016) M. J. Mendell et al. INDOOR AIR
- Fungal compositions and diversities on indoor surfaces with visible mold growths in residential buildings in the Seoul Capital Area of South Korea
- (2015) C. An et al. INDOOR AIR
- A Comprehensive, Automatically Updated Fungal ITS Sequence Dataset for Reference-Based Chimera Control in Environmental Sequencing Efforts
- (2015) R. Henrik Nilsson et al. MICROBES AND ENVIRONMENTS
- Phylogenetic classification of yeasts and related taxa within Pucciniomycotina
- (2015) Q.-M. Wang et al. STUDIES IN MYCOLOGY
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi
- (2014) C. L. Schoch et al. Database-The Journal of Biological Databases and Curation
- Association of indoor dampness and molds with rhinitis risk: A systematic review and meta-analysis
- (2013) Maritta S. Jaakkola et al. JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY
- Fungal High-throughput Taxonomic Identification tool for use with Next-Generation Sequencing (FHiTINGS)
- (2013) Karen C. Dannemiller et al. JOURNAL OF BASIC MICROBIOLOGY
- Fungal community analysis by high-throughput sequencing of amplified markers - a user's guide
- (2013) Björn D. Lindahl et al. NEW PHYTOLOGIST
- New primers to amplify the fungal ITS2 region - evaluation by 454-sequencing of artificial and natural communities
- (2012) Katarina Ihrmark et al. FEMS MICROBIOLOGY ECOLOGY
- Particle-size distributions and seasonal diversity of allergenic and pathogenic fungi in outdoor air
- (2012) Naomichi Yamamoto et al. ISME Journal
- Residential Dampness and Molds and the Risk of Developing Asthma: A Systematic Review and Meta-Analysis
- (2012) Reginald Quansah et al. PLoS One
- Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi
- (2012) C. L. Schoch et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Respiratory and Allergic Health Effects of Dampness, Mold, and Dampness-Related Agents: A Review of the Epidemiologic Evidence
- (2011) Mark J. Mendell et al. ENVIRONMENTAL HEALTH PERSPECTIVES
- Assessing allergenic fungi in house dust by floor wipe sampling and quantitative PCR
- (2011) N. Yamamoto et al. INDOOR AIR
- Accuracy, Precision, and Method Detection Limits of Quantitative PCR for Airborne Bacteria and Fungi
- (2010) D. Hospodsky et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
- (2009) P. D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Strain-Dependent Variation in 18S Ribosomal DNA Copy Numbers in Aspergillus fumigatus
- (2009) M. L. Herrera et al. JOURNAL OF CLINICAL MICROBIOLOGY
- 454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity
- (2009) M. Buée et al. NEW PHYTOLOGIST
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started