A common binding motif in the ET domain of BRD3 forms polymorphic structural interfaces with host and viral proteins
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
A common binding motif in the ET domain of BRD3 forms polymorphic structural interfaces with host and viral proteins
Authors
Keywords
integrase, BET proteins, solution NMR, NSD3, BRD3, extraterminal domain, isotope peptide labeling, interdomain dynamics, Moloney murine leukemia virus
Journal
STRUCTURE
Volume -, Issue -, Pages -
Publisher
Elsevier BV
Online
2021-02-16
DOI
10.1016/j.str.2021.01.010
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- I-PINE web server: an integrative probabilistic NMR assignment system for proteins
- (2019) Woonghee Lee et al. JOURNAL OF BIOMOLECULAR NMR
- The EMBL-EBI search and sequence analysis tools APIs in 2019
- (2019) Fábio Madeira et al. NUCLEIC ACIDS RESEARCH
- Retroviral integration into nucleosomes through DNA looping and sliding along the histone octamer
- (2019) Marcus D. Wilson et al. Nature Communications
- Disrupting MLV integrase:BET protein interaction biases integration into quiescent chromatin and delays but does not eliminate tumor activation in a MYC/Runx2 mouse model
- (2019) Lorenz Loyola et al. PLoS Pathogens
- The BRD3 ET domain recognizes a short peptide motif through a mechanism that is conserved across chromatin remodelers and transcriptional regulators
- (2018) Dorothy C. C. Wai et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- The role of histone lysine methyltransferase NSD3 in cancer
- (2018) Xu Han et al. OncoTargets and Therapy
- DUB3 Promotes BET Inhibitor Resistance and Cancer Progression by Deubiquitinating BRD4
- (2018) Xin Jin et al. MOLECULAR CELL
- Post-mitotic BET-induced reshaping of integrase quaternary structure supports wild-type MLV integration
- (2018) Doortje Borrenberghs et al. NUCLEIC ACIDS RESEARCH
- The Pfam protein families database in 2019
- (2018) Sara El-Gebali et al. NUCLEIC ACIDS RESEARCH
- Clustal Omega for making accurate alignments of many protein sequences
- (2017) Fabian Sievers et al. PROTEIN SCIENCE
- Structural Mechanism of the Oxygenase JMJD6 Recognition by the Extraterminal (ET) Domain of BRD4
- (2017) Tsuyoshi Konuma et al. Scientific Reports
- The Role of Nuclear Receptor–Binding SET Domain Family Histone Lysine Methyltransferases in Cancer
- (2017) Richard L. Bennett et al. Cold Spring Harbor Perspectives in Medicine
- Just a Flexible Linker? The Structural and Dynamic Properties of CBP-ID4 Revealed by NMR Spectroscopy
- (2016) Alessandro Piai et al. BIOPHYSICAL JOURNAL
- The Role of Protein Loops and Linkers in Conformational Dynamics and Allostery
- (2016) Elena Papaleo et al. CHEMICAL REVIEWS
- Repression of the Chromatin-Tethering Domain of Murine Leukemia Virus p12
- (2016) Jonathon D. Brzezinski et al. JOURNAL OF VIROLOGY
- Phosphorylation Requirement of Murine Leukemia Virus p12
- (2016) Jonathon D. Brzezinski et al. JOURNAL OF VIROLOGY
- Effects of Membrane Charge and Order on Membrane Binding of the Retroviral Structural Protein Gag
- (2016) Yi Wen et al. JOURNAL OF VIROLOGY
- Structure of the Brd4 ET domain bound to a C-terminal motif from γ-retroviral integrases reveals a conserved mechanism of interaction
- (2016) Brandon L. Crowe et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A Second RNA-Binding Site in the NS1 Protein of Influenza B Virus
- (2016) Li-Chung Ma et al. STRUCTURE
- Structural Mechanism of Transcriptional Regulator NSD3 Recognition by the ET Domain of BRD4
- (2016) Qiang Zhang et al. STRUCTURE
- IBS: an illustrator for the presentation and visualization of biological sequences: Fig. 1.
- (2015) Wenzhong Liu et al. BIOINFORMATICS
- Structural and sequencing analysis of local target DNA recognition by MLV integrase
- (2015) S. Aiyer et al. NUCLEIC ACIDS RESEARCH
- NMRFAM-SPARKY: enhanced software for biomolecular NMR spectroscopy
- (2014) Woonghee Lee et al. BIOINFORMATICS
- Enhancers Are Major Targets for Murine Leukemia Virus Vector Integration
- (2014) S. S. De Ravin et al. JOURNAL OF VIROLOGY
- Altering murine leukemia virus integration through disruption of the integrase and BET protein family interaction
- (2014) Sriram Aiyer et al. NUCLEIC ACIDS RESEARCH
- MLV integration site selection is driven by strong enhancers and active promoters
- (2014) Matthew C. LaFave et al. NUCLEIC ACIDS RESEARCH
- Selective Inhibition of Tumor Oncogenes by Disruption of Super-Enhancers
- (2013) Jakob Lovén et al. CELL
- Brd4 and JMJD6-Associated Anti-Pause Enhancers in Regulation of Transcriptional Pause Release
- (2013) Wen Liu et al. CELL
- PDBStat: a universal restraint converter and restraint analysis software package for protein NMR
- (2013) Roberto Tejero et al. JOURNAL OF BIOMOLECULAR NMR
- Protein backbone and sidechain torsion angles predicted from NMR chemical shifts using artificial neural networks
- (2013) Yang Shen et al. JOURNAL OF BIOMOLECULAR NMR
- Bromo- and Extraterminal Domain Chromatin Regulators Serve as Cofactors for Murine Leukemia Virus Integration
- (2013) Saumya Shree Gupta et al. JOURNAL OF VIROLOGY
- BET proteins promote efficient murine leukemia virus integration at transcription start sites
- (2013) A. Sharma et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The BET Family of Proteins Targets Moloney Murine Leukemia Virus Integration near Transcription Start Sites
- (2013) Jan De Rijck et al. Cell Reports
- A Structural Basis for BRD2/4-Mediated Host Chromatin Interaction and Oligomer Assembly of Kaposi Sarcoma-Associated Herpesvirus and Murine Gammaherpesvirus LANA Proteins
- (2013) Jan Hellert et al. PLoS Pathogens
- RPF: a quality assessment tool for protein NMR structures
- (2012) Y. J. Huang et al. NUCLEIC ACIDS RESEARCH
- MuLV IN mutants responsive to HDAC inhibitors enhance transcription from unintegrated retroviral DNA
- (2012) William M. Schneider et al. VIROLOGY
- The Brd4 Extraterminal Domain Confers Transcription Activation Independent of pTEFb by Recruiting Multiple Proteins, Including NSD3
- (2011) S. Rahman et al. MOLECULAR AND CELLULAR BIOLOGY
- Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega
- (2011) F. Sievers et al. Molecular Systems Biology
- Dynamic Allostery: Linkers Are Not Merely Flexible
- (2011) Buyong Ma et al. STRUCTURE
- A microscale protein NMR sample screening pipeline
- (2009) Paolo Rossi et al. JOURNAL OF BIOMOLECULAR NMR
- Single-round selection yields a unique retroviral envelope utilizing GPR172A as its host receptor
- (2009) P. M. Mazari et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Probabilistic Interaction Network of Evidence Algorithm and its Application to Complete Labeling of Peak Lists from Protein NMR Spectroscopy
- (2009) Arash Bahrami et al. PLoS Computational Biology
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started