Circadian time series proteomics reveals daily dynamics in cartilage physiology

Circadian control of the secretory pathway maintains collagen homeostasis

(2020) Joan Chang et al.   NATURE CELL BIOLOGY

Eukaryotic cell biology is temporally coordinated to support the energetic demands of protein homeostasis

(2020) John S. O’ Neill et al.   Nature Communications

Diurnal Rhythms Spatially and Temporally Organize Autophagy

(2019) Mikhail Ryzhikov et al.   Cell Reports

Diurnal transcriptome atlas of a primate across major neural and peripheral tissues

(2018) Ludovic S. Mure et al.   SCIENCE

A proteomics landscape of circadian clock in mouse liver

(2018) Yunzhi Wang et al.   Nature Communications

Ubiquitylation Dynamics of the Clock Cell Proteome and TIMELESS during a Circadian Cycle

(2018) Áron Szabó et al.   Cell Reports

In vitro comprehensive analysis of VA692 a new chemical entity for the treatment of osteoarthritis

(2018) Sara Cheleschi et al.   INTERNATIONAL IMMUNOPHARMACOLOGY

UniProt: a worldwide hub of protein knowledge

(2018)   NUCLEIC ACIDS RESEARCH

Guidelines for Genome-Scale Analysis of Biological Rhythms

(2017) Michael E. Hughes et al.   JOURNAL OF BIOLOGICAL RHYTHMS

Circadian actin dynamics drive rhythmic fibroblast mobilization during wound healing

(2017) Nathaniel P. Hoyle et al.   Science Translational Medicine

Temperature regulates splicing efficiency of the cold-inducible RNA-binding protein geneCirbp

(2016) Ivana Gotic et al.   GENES & DEVELOPMENT

Circadian Clocks in Articular Cartilage and Bone

(2016) Nan Yang et al.   JOURNAL OF BIOLOGICAL RHYTHMS

Transcriptional architecture of the mammalian circadian clock

(2016) Joseph S. Takahashi   NATURE REVIEWS GENETICS

Ribosome profiling reveals the rhythmic liver translatome and circadian clock regulation by upstream open reading frames

(2015) Peggy Janich et al.   GENOME RESEARCH

The chondrocyte clock gene Bmal1 controls cartilage homeostasis and integrity

(2015) Michal Dudek et al.   JOURNAL OF CLINICAL INVESTIGATION

Analysis of the Human Adult Urinary Metabolome Variations with Age, Body Mass Index, and Gender by Implementing a Comprehensive Workflow for Univariate and OPLS Statistical Analyses

(2015) Etienne A. Thévenot et al.   JOURNAL OF PROTEOME RESEARCH

Diurnal Variation in Distal Femoral Cartilage Thickness

(2015) E. KILIC et al.   JOURNAL OF RHEUMATOLOGY

Definition of a consensus integrin adhesome and its dynamics during adhesion complex assembly and disassembly

(2015) Edward R. Horton et al.   NATURE CELL BIOLOGY

Catabolic cytokines disrupt the circadian clock and the expression of clock-controlled genes in cartilage via an NFкB-dependent pathway

(2015) B. Guo et al.   OSTEOARTHRITIS AND CARTILAGE

HSP90 Affects the Stability of BMAL1 and Circadian Gene Expression

(2014) Rebecca Schneider et al.   JOURNAL OF BIOLOGICAL RHYTHMS

In-Vivo Quantitative Proteomics Reveals a Key Contribution of Post-Transcriptional Mechanisms to the Circadian Regulation of Liver Metabolism

(2014) Maria S. Robles et al.   PLoS Genetics

Hsp90 Inhibition Protects Against Biomechanically Induced Osteoarthritis in Rats

(2013) Michiel Siebelt et al.   ARTHRITIS AND RHEUMATISM

Mechanical loading stimulates chondrogenesis via the PKA/CREB-Sox9 and PP2A pathways in chicken micromass cultures

(2013) Tamás Juhász et al.   CELLULAR SIGNALLING

Comparative Proteomic Analysis of Normal and Collagen IX Null Mouse Cartilage Reveals Altered Extracellular Matrix Composition and Novel Components of the Collagen IX Interactome

(2013) Bent Brachvogel et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Activation of p107 by Fibroblast Growth Factor, Which Is Essential for Chondrocyte Cell Cycle Exit, Is Mediated by the Protein Phosphatase 2A/B55α Holoenzyme

(2013) Alison Kurimchak et al.   MOLECULAR AND CELLULAR BIOLOGY

Prolonged Bioluminescence Monitoring in Mouse Ex Vivo Bone Culture Revealed Persistent Circadian Rhythms in Articular Cartilages and Growth Plates

(2013) Naoki Okubo et al.   PLoS One

The Circadian Clock Coordinates Ribosome Biogenesis

(2013) Céline Jouffe et al.   PLOS BIOLOGY

Joint immobilization prevents murine osteoarthritis and reveals the highly mechanosensitive nature of protease expression in vivo

(2012) Annika Burleigh et al.   ARTHRITIS AND RHEUMATISM

Circadian control of mRNA polyadenylation dynamics regulates rhythmic protein expression

(2012) S. Kojima et al.   GENES & DEVELOPMENT

Towards definition of an ECM parts list: An advance on GO categories

(2012) Alexandra Naba et al.   MATRIX BIOLOGY

Nascent-Seq reveals novel features of mouse circadian transcriptional regulation

(2012) Jerome S Menet et al.   eLife

The Matrisome:In SilicoDefinition andIn VivoCharacterization by Proteomics of Normal and Tumor Extracellular Matrices

(2011) Alexandra Naba et al.   MOLECULAR & CELLULAR PROTEOMICS

Comprehensive Profiling of Cartilage Extracellular Matrix Formation and Maturation Using Sequential Extraction and Label-free Quantitative Proteomics

(2010) Richard Wilson et al.   MOLECULAR & CELLULAR PROTEOMICS

Hsp90  and p130cas: novel regulatory factors of MMP-13 expression in human osteoarthritic chondrocytes

(2008) Z Fan et al.   ANNALS OF THE RHEUMATIC DISEASES

Primary culture and phenotyping of murine chondrocytes

(2008) Marjolaine Gosset et al.   Nature Protocols

Anti-apoptotic effect of transforming growth factor-β1 on human articular chondrocytes: role of protein phosphatase 2A

(2008) M. Lires-Deán et al.   OSTEOARTHRITIS AND CARTILAGE