Acute BAF perturbation causes immediate changes in chromatin accessibility
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Title
Acute BAF perturbation causes immediate changes in chromatin accessibility
Authors
Keywords
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Journal
NATURE GENETICS
Volume 53, Issue 3, Pages 269-278
Publisher
Springer Science and Business Media LLC
Online
2021-02-09
DOI
10.1038/s41588-021-00777-3
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Note: Only part of the references are listed.- ARID1A determines luminal identity and therapeutic response in estrogen-receptor-positive breast cancer
- (2020) Guotai Xu et al. NATURE GENETICS
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- (2020) Felix Dietlein et al. NATURE GENETICS
- Structure of nucleosome-bound human BAF complex
- (2020) Shuang He et al. SCIENCE
- Cryo-EM structure of SWI/SNF complex bound to a nucleosome
- (2020) Yan Han et al. NATURE
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- (2020) Felix R. Wagner et al. NATURE
- Selective Mediator dependence of cell-type-specifying transcription
- (2020) Martin G. Jaeger et al. NATURE GENETICS
- The SWI/SNF complex in cancer — biology, biomarkers and therapy
- (2020) Priya Mittal et al. Nature Reviews Clinical Oncology
- A Structural Model of the Endogenous Human BAF Complex Informs Disease Mechanisms
- (2020) Nazar Mashtalir et al. CELL
- Mammalian SWI/SNF collaborates with a polycomb-associated protein to regulate male germ line transcription in the mouse
- (2019) Debashish U. Menon et al. DEVELOPMENT
- Mammalian ISWI and SWI/SNF selectively mediate binding of distinct transcription factors
- (2019) Darko Barisic et al. NATURE
- BAF complex vulnerabilities in cancer demonstrated via structure-based PROTAC design
- (2019) William Farnaby et al. Nature Chemical Biology
- Systematic characterization of BAF mutations provides insights into intracomplex synthetic lethalities in human cancers
- (2019) Sandra Schick et al. NATURE GENETICS
- Opposing chromatin remodelers control transcription initiation frequency and start site selection
- (2019) Slawomir Kubik et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Structure of the RSC complex bound to the nucleosome
- (2019) Youpi Ye et al. SCIENCE
- Comprehensive Characterization of Cancer Driver Genes and Mutations
- (2018) Matthew H. Bailey et al. CELL
- The dTAG system for immediate and target-specific protein degradation
- (2018) Behnam Nabet et al. Nature Chemical Biology
- RSAT 2018: regulatory sequence analysis tools 20th anniversary
- (2018) Nga Thi Thuy Nguyen et al. NUCLEIC ACIDS RESEARCH
- ARID1A mutation sensitizes most ovarian clear cell carcinomas to BET inhibitors
- (2018) Katrien Berns et al. ONCOGENE
- Degron mediated BRM/SMARCA2 depletion uncovers novel combination partners for treatment of BRG1/SMARCA4-mutant cancers
- (2018) Florencia Rago et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Modular Organization and Assembly of SWI/SNF Family Chromatin Remodeling Complexes
- (2018) Nazar Mashtalir et al. CELL
- Discovery of Orally Active Inhibitors of Brahma Homolog (BRM)/SMARCA2 ATPase Activity for the Treatment of Brahma Related Gene 1 (BRG1)/SMARCA4-Mutant Cancers
- (2018) Julien P. N. Papillon et al. JOURNAL OF MEDICINAL CHEMISTRY
- Transcription control by the ENL YEATS domain in acute leukaemia
- (2017) Michael A. Erb et al. NATURE
- SMARCB1 is required for widespread BAF complex–mediated activation of enhancers and bivalent promoters
- (2017) Robert T Nakayama et al. NATURE GENETICS
- Dominant-negative SMARCA4 mutants alter the accessibility landscape of tissue-unrestricted enhancers
- (2017) H. Courtney Hodges et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- TOP2 synergizes with BAF chromatin remodeling for both resolution and formation of facultative heterochromatin
- (2017) Erik L Miller et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- The SWI/SNF chromatin remodelling complex is required for maintenance of lineage specific enhancers
- (2017) Burak H. Alver et al. Nature Communications
- Dominant-negative SMARCA4 mutants alter the accessibility landscape of tissue-unrestricted enhancers
- (2017) H. Courtney Hodges et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- TOP2 synergizes with BAF chromatin remodeling for both resolution and formation of facultative heterochromatin
- (2017) Erik L Miller et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Chromatin accessibility underlies synthetic lethality of SWI/SNF subunits in ARID1A-mutant cancers
- (2017) Timothy W R Kelso et al. eLife
- The pioneer factor OCT4 requires the chromatin remodeller BRG1 to support gene regulatory element function in mouse embryonic stem cells
- (2017) Hamish W King et al. eLife
- Dynamics of BAF–Polycomb complex opposition on heterochromatin in normal and oncogenic states
- (2016) Cigall Kadoch et al. NATURE GENETICS
- SMARCB1-mediated SWI/SNF complex function is essential for enhancer regulation
- (2016) Xiaofeng Wang et al. NATURE GENETICS
- ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice
- (2016) Radhika Mathur et al. NATURE GENETICS
- Base-pair-resolution genome-wide mapping of active RNA polymerases using precision nuclear run-on (PRO-seq)
- (2016) Dig Bijay Mahat et al. Nature Protocols
- deepTools2: a next generation web server for deep-sequencing data analysis
- (2016) Fidel Ramírez et al. NUCLEIC ACIDS RESEARCH
- The Many Roles of BAF (mSWI/SNF) and PBAF Complexes in Cancer
- (2016) Courtney Hodges et al. Cold Spring Harbor Perspectives in Medicine
- LOLA: enrichment analysis for genomic region sets and regulatory elements in R and Bioconductor
- (2015) Nathan C. Sheffield et al. BIOINFORMATICS
- Gene essentiality and synthetic lethality in haploid human cells
- (2015) V. A. Blomen et al. SCIENCE
- Loss of BAF (mSWI/SNF) Complexes Causes Global Transcriptional and Chromatin State Changes in Forebrain Development
- (2015) Ramanathan Narayanan et al. Cell Reports
- Mammalian SWI/SNF chromatin remodeling complexes and cancer: Mechanistic insights gained from human genomics
- (2015) C. Kadoch et al. Science Advances
- Residual Complexes Containing SMARCA2 (BRM) Underlie the Oncogenic Drive of SMARCA4 (BRG1) Mutation
- (2014) B. G. Wilson et al. MOLECULAR AND CELLULAR BIOLOGY
- Functional epigenetics approach identifies BRM/SMARCA2 as a critical synthetic lethal target in BRG1-deficient cancers
- (2014) G. R. Hoffman et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A Synthetic Lethality-Based Strategy to Treat Cancers Harboring a Genetic Deficiency in the Chromatin Remodeling Factor BRG1
- (2013) T. Oike et al. CANCER RESEARCH
- Selective Inhibition of Tumor Oncogenes by Disruption of Super-Enhancers
- (2013) Jakob Lovén et al. CELL
- Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes
- (2013) Warren A. Whyte et al. CELL
- Super-Enhancers in the Control of Cell Identity and Disease
- (2013) Denes Hnisz et al. CELL
- Proteomic and bioinformatic analysis of mammalian SWI/SNF complexes identifies extensive roles in human malignancy
- (2013) Cigall Kadoch et al. NATURE GENETICS
- The Spectrum of SWI/SNF Mutations, Ubiquitous in Human Cancers
- (2013) A. Hunter Shain et al. PLoS One
- clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters
- (2012) Guangchuang Yu et al. OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY
- ATP-dependent chromatin remodeling: genetics, genomics and mechanisms
- (2011) Diana C Hargreaves et al. CELL RESEARCH
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities
- (2010) Sven Heinz et al. MOLECULAR CELL
- Universal sample preparation method for proteome analysis
- (2009) Jacek R Wiśniewski et al. NATURE METHODS
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