Curvature Energetics Determined by Alchemical Simulation on Four Topologically Distinct Lipid Phases

Spontaneous Curvature, Differential Stress, and Bending Modulus of Asymmetric Lipid Membranes

(2020) Amirali Hossein et al.   BIOPHYSICAL JOURNAL

A consistent quadratic curvature-tilt theory for fluid lipid membranes

(2019) M. Mert Terzi et al.   JOURNAL OF CHEMICAL PHYSICS

Phospholipid Chain Interactions with Cholesterol Drive Domain Formation in Lipid Membranes

(2018) W. F. Drew Bennett et al.   BIOPHYSICAL JOURNAL

Myomaker and Myomerger Work Independently to Control Distinct Steps of Membrane Remodeling during Myoblast Fusion

(2018) Evgenia Leikina et al.   DEVELOPMENTAL CELL

Novel tilt-curvature coupling in lipid membranes

(2017) M. Mert Terzi et al.   JOURNAL OF CHEMICAL PHYSICS

Characterizing Residue-Bilayer Interactions Using Gramicidin A as a Scaffold and Tryptophan Substitutions as Probes

(2017) Andrew H. Beaven et al.   Journal of Chemical Theory and Computation

Calculating Transition Energy Barriers and Characterizing Activation States for Steps of Fusion

(2016) Rolf J. Ryham et al.   BIOPHYSICAL JOURNAL

Molecular dynamics at constant Cauchy stress

(2016) Ronald E. Miller et al.   JOURNAL OF CHEMICAL PHYSICS

CHARMM-GUI 10 years for biomolecular modeling and simulation

(2016) Sunhwan Jo et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Rhodopsin/Lipid Hydrophobic Matching—Rhodopsin Oligomerization and Function

(2015) Olivier Soubias et al.   BIOPHYSICAL JOURNAL

Fluid lipid membranes: From differential geometry to curvature stresses

(2015) Markus Deserno   CHEMISTRY AND PHYSICS OF LIPIDS

Mechanical properties of lipid bilayers from molecular dynamics simulation

(2015) Richard M. Venable et al.   CHEMISTRY AND PHYSICS OF LIPIDS

Determining the pivotal plane of fluid lipid membranes in simulations

(2015) Markus Deserno   JOURNAL OF CHEMICAL PHYSICS

How Tolerant are Membrane Simulations with Mismatch in Area per Lipid between Leaflets?

(2015) Soohyung Park et al.   Journal of Chemical Theory and Computation

CHARMM-GUI Martini Maker for Coarse-Grained Simulations with the Martini Force Field

(2015) Yifei Qi et al.   Journal of Chemical Theory and Computation

The role of membrane curvature elastic stress for function of rhodopsin-like G protein-coupled receptors

(2014) Olivier Soubias et al.   BIOCHIMIE

CHARMM All-Atom Additive Force Field for Sphingomyelin: Elucidation of Hydrogen Bonding and of Positive Curvature

(2014) Richard M. Venable et al.   BIOPHYSICAL JOURNAL

Curvature and Lipid Packing Modulate the Elastic Properties of Lipid Assemblies: Comparing HII and Lamellar Phases

(2014) Niklaus Johner et al.   Journal of Physical Chemistry Letters

Bending Free Energy from Simulation: Correspondence of Planar and Inverse Hexagonal Lipid Phases

(2013) Alexander J. Sodt et al.   BIOPHYSICAL JOURNAL

Curvature Forces in Membrane Lipid–Protein Interactions

(2012) Michael F. Brown   BIOCHEMISTRY

Determining the Gaussian Curvature Modulus of Lipid Membranes in Simulations

(2012) Mingyang Hu et al.   BIOPHYSICAL JOURNAL

Elastic properties of polyunsaturated phosphatidylethanolamines influence rhodopsin function

(2012) Walter E. Teague et al.   FARADAY DISCUSSIONS

Gaussian curvature elasticity determined from global shape transformations and local stress distributions: a comparative study using the MARTINI model

(2012) Mingyang Hu et al.   FARADAY DISCUSSIONS

Determining Biomembrane Bending Rigidities from Simulations of Modest Size

(2012) Max C. Watson et al.   PHYSICAL REVIEW LETTERS

Contribution of Membrane Elastic Energy to Rhodopsin Function

(2010) Olivier Soubias et al.   BIOPHYSICAL JOURNAL

PACKMOL: A package for building initial configurations for molecular dynamics simulations

(2009) L. Martínez et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

A Single Bicontinuous Cubic Phase Induced by Fusion Peptides

(2009) Marc Fuhrmans et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Curvature effects on lipid packing and dynamics in liposomes revealed by coarse grained molecular dynamics simulations

(2009) H. Jelger Risselada et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

The Hydrophobic Insertion Mechanism of Membrane Curvature Generation by Proteins

(2008) Felix Campelo et al.   BIOPHYSICAL JOURNAL

CHARMM-GUI: A web-based graphical user interface for CHARMM

(2008) Sunhwan Jo et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Application of Mean Field Boundary Potentials in Simulations of Lipid Vesicles

(2008) H. Jelger Risselada et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Accurate Determination of Elastic Parameters for Multicomponent Membranes

(2008) Stefan Semrau et al.   PHYSICAL REVIEW LETTERS