Metagenomic next-generation sequencing for the diagnosis of suspected pneumonia in immunocompromised patients

Diagnosis of severe respiratory infections in immunocompromised patients

(2020) Elie Azoulay et al.   INTENSIVE CARE MEDICINE

Metagenomic next-generation sequencing for mixed pulmonary infection diagnosis

(2020) Jiahui Wang et al.   BMC Pulmonary Medicine

Clinical Metagenomic Sequencing for Diagnosis of Meningitis and Encephalitis

(2019) Michael R. Wilson et al.   NEW ENGLAND JOURNAL OF MEDICINE

Application of metagenomic next-generation sequencing for bronchoalveolar lavage diagnostics in critically ill patients

(2019) Ying Li et al.   EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES

Microbial Lineages in Sarcoidosis. A Metagenomic Analysis Tailored for Low–Microbial Content Samples

(2018) Erik L. Clarke et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Metagenomic Sequencing Detects Respiratory Pathogens in Hematopoietic Cellular Transplant Patients

(2018) Charles Langelier et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Practical issues in implementing whole-genome-sequencing in routine diagnostic microbiology

(2018) J.W.A. Rossen et al.   CLINICAL MICROBIOLOGY AND INFECTION

Encephalitis diagnosis using metagenomics: application of next generation sequencing for undiagnosed cases

(2018) Julianne R. Brown et al.   JOURNAL OF INFECTION

Chronic Meningitis Investigated via Metagenomic Next-Generation Sequencing

(2018) Michael R. Wilson et al.   JAMA Neurology

Pulmonary Metagenomic Sequencing Suggests Missed Infections in Immunocompromised Children

(2018) M S Zinter et al.   CLINICAL INFECTIOUS DISEASES

OUP accepted manuscript

(2018)   CLINICAL INFECTIOUS DISEASES

Comparison the pathogen diagnosis of severe pneumonia by using next generation sequencing and traditional detection methods, China, 2010-2018

(2018) Yun Xie et al.   JOURNAL OF INFECTION

Clinical Metagenomic Next-Generation Sequencing for Pathogen Detection

(2018) Wei Gu et al.   Annual Review of Pathology-Mechanisms of Disease

Next-generation sequencing of the BALF in the diagnosis of community-acquired pneumonia in immunocompromised patients

(2018) Tingting Pan et al.   JOURNAL OF INFECTION

Acute respiratory failure in immunocompromised adults

(2018) Elie Azoulay et al.   Lancet Respiratory Medicine

Acute hypoxemic respiratory failure in immunocompromised patients: the Efraim multinational prospective cohort study

(2017) Elie Azoulay et al.   INTENSIVE CARE MEDICINE

Diagnosis of cytomegalovirus pneumonia by quantitative polymerase chain reaction using bronchial washing fluid from patients with hematologic malignancies

(2017) Hwa Young Lee et al.   Oncotarget

Practice Guidelines for the Diagnosis and Management of Aspergillosis: 2016 Update by the Infectious Diseases Society of America

(2016) Thomas F. Patterson et al.   CLINICAL INFECTIOUS DISEASES

Polymicrobial pulmonary infection in patients with hematological malignancies: prevalence, co-pathogens, course and outcome

(2016) Emilia Hardak et al.   INFECTION

The potential of whole genome NGS for infectious disease diagnosis

(2015) Marc Lecuit et al.   EXPERT REVIEW OF MOLECULAR DIAGNOSTICS

Clinical Utility of Unbiased Metagenomic Next-Generation Sequencing in Diagnosis of Acute Infectious Diseases: A Prospective Case Series

(2015) Samia N. Naccache et al.   Open Forum Infectious Diseases

The Feasibility Study of Non-Invasive Fetal Trisomy 18 and 21 Detection with Semiconductor Sequencing Platform

(2014) Young Joo Jeon et al.   PLoS One

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS