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ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R

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OUP accepted manuscript

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Reducing Phosphorus to Curb Lake Eutrophication is a Success

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Urban point sources of nutrients were the leading cause for the historical spread of hypoxia across European lakes

(2016) Jean-Philippe Jenny et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Decoupling function and taxonomy in the global ocean microbiome

(2016) S. Louca et al.   SCIENCE

Pronounced daily succession of phytoplankton, archaea and bacteria following a spring bloom

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The nexus of syntrophy-associated microbiota in anaerobic digestion revealed by long-term enrichment and community survey

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Lake eutrophication and its implications for organic carbon sequestration in Europe

(2014) N. J. Anderson et al.   GLOBAL CHANGE BIOLOGY

Elevated nitrate enriches microbial functional genes for potential bioremediation of complexly contaminated sediments

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Analysis on the formation condition of the algae-induced odorous black water agglomerate

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Biogeochemistry and community ecology in a spring-fed urban river following a major earthquake

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Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Integrated solutions for urban runoff pollution control in Brazilian metropolitan regions

(2012) A. C. D. Morihama et al.   WATER SCIENCE AND TECHNOLOGY

Acinetobacter infection - an emerging threat to human health

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Detection of Spatial and Temporal Influences on Bacterial Communities in an Urban Stream by Automated Ribosomal Intergenic Ribosomal Spacer Analysis

(2011) Amitai Or et al.   MICROBES AND ENVIRONMENTS

Bayesian community-wide culture-independent microbial source tracking

(2011) Dan Knights et al.   NATURE METHODS

Characterization of the heterotrophic biomass and the endogenous residue of activated sludge

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QIIME allows analysis of high-throughput community sequencing data

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Antimicrobial resistance of heterotrophic bacteria in sewage-contaminated rivers

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Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Shifts in Lake N:P Stoichiometry and Nutrient Limitation Driven by Atmospheric Nitrogen Deposition

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