Diversity and structure of phenanthrene degrading bacterial communities associated with fungal bioremediation in petroleum contaminated soil

Influence of bioaugmentation and biostimulation on PAH degradation in aged contaminated soils: Response and dynamics of the bacterial community

(2019) Nagalakshmi Haleyur et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

Oxidation of benzo[ a ]pyrene by laccase in soil enhances bound residue formation and reduces disturbance to soil bacterial community composition

(2018) Jun Zeng et al.   ENVIRONMENTAL POLLUTION

Biphenyl-Metabolizing Microbial Community and a Functional Operon Revealed in E-Waste-Contaminated Soil

(2018) Longfei Jiang et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Autochthonous Bioaugmentation-Modified Bacterial Diversity of Phenanthrene Degraders in PAH-Contaminated Wastewater as Revealed by DNA-Stable Isotope Probing

(2018) Jibing Li et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Coupling magnetic-nanoparticle mediated isolation (MMI) and stable isotope probing (SIP) for identifying and isolating the active microbes involved in phenanthrene degradation in wastewater with higher resolution and accuracy

(2018) Jibing Li et al.   WATER RESEARCH

Effect of biostimulation on the distribution and composition of the microbial community of a polycyclic aromatic hydrocarbon-contaminated landfill soil during bioremediation

(2018) Eman Koshlaf et al.   GEODERMA

Low effect of phenanthrene bioaccessibility on its biodegradation in diffusely contaminated soil

(2017) M. Crampon et al.   ENVIRONMENTAL POLLUTION

Polycyclic aromatic hydrocarbons (PAHs) enriching antibiotic resistance genes (ARGs) in the soils

(2017) Baowei Chen et al.   ENVIRONMENTAL POLLUTION

Biodegradation of Phenanthrene in Polycyclic Aromatic Hydrocarbon-Contaminated Wastewater Revealed by Coupling Cultivation-Dependent and -Independent Approaches

(2017) Jibing Li et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Metagenomic insight into the bioaugmentation mechanism of Phanerochaete chrysosporium in an activated sludge system treating coking wastewater

(2017) Wang Hailei et al.   JOURNAL OF HAZARDOUS MATERIALS

Microbial mechanisms controlling the rhizosphere effect of ryegrass on degradation of polycyclic aromatic hydrocarbons in an aged-contaminated agricultural soil

(2017) Meixia Guo et al.   SOIL BIOLOGY & BIOCHEMISTRY

Mycelium-Like Networks Increase Bacterial Dispersal, Growth, and Biodegradation in a Model Ecosystem at Various Water Potentials

(2016) Anja Worrich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterization of a phenanthrene-degrading microbial consortium enriched from petrochemical contaminated environment

(2016) Fangkui Wang et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Enhanced biodegradation of PAHs by microbial consortium with different amendment and their fate in in-situ condition

(2016) Anamika Sharma et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

Polycyclic aromatic hydrocarbons degradation and microbial community shifts during co-composting of creosote-treated wood

(2016) Stefano Covino et al.   JOURNAL OF HAZARDOUS MATERIALS

Comparative metagenomic analysis of PAH degradation in soil by a mixed microbial consortium

(2016) German Zafra et al.   JOURNAL OF HAZARDOUS MATERIALS

Bacteria capable of degrading anthracene, phenanthrene, and fluoranthene as revealed by DNA based stable-isotope probing in a forest soil

(2016) Mengke Song et al.   JOURNAL OF HAZARDOUS MATERIALS

Identification of Anthraquinone-Degrading Bacteria in Soil Contaminated with Polycyclic Aromatic Hydrocarbons

(2015) Elyse A. Rodgers-Vieira et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley

(2015) Davide Bulgarelli et al.   Cell Host & Microbe

Aerobic Bioremediation of PAH Contaminated Soil Results in Increased Genotoxicity and Developmental Toxicity

(2015) Leah Chibwe et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Biodegradation of polycyclic aromatic hydrocarbons by Trichoderma species: a mini review

(2015) German Zafra et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Impact of clay mineral, wood sawdust or root organic matter on the bacterial and fungal community structures in two aged PAH-contaminated soils

(2015) Aurélie Cébron et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Allochthonous bioaugmentation in ex situ treatment of crude oil-polluted sediments in the presence of an effective degrading indigenous microbiome

(2015) S. Fodelianakis et al.   JOURNAL OF HAZARDOUS MATERIALS

Pyrosequencing reveals the effect of mobilizing agents and lignocellulosic substrate amendment on microbial community composition in a real industrial PAH-polluted soil

(2015) S. Lladó et al.   JOURNAL OF HAZARDOUS MATERIALS

limma powers differential expression analyses for RNA-sequencing and microarray studies

(2015) Matthew E. Ritchie et al.   NUCLEIC ACIDS RESEARCH

Implications of polluted soil biostimulation and bioaugmentation with spent mushroom substrate ( Agaricus bisporus ) on the microbial community and polycyclic aromatic hydrocarbons biodegradation

(2015) Carlos García-Delgado et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Complex Interactions Between the Macrophyte Acorus Calamus and Microbial Fuel Cells During Pyrene and Benzo[a]Pyrene Degradation in Sediments

(2015) Zaisheng Yan et al.   Scientific Reports

Global diversity and geography of soil fungi

(2014) L. Tedersoo et al.   SCIENCE

Development of permeable reactive biobarrier for the removal of PAHs by Trichoderma longibrachiatum

(2013) M. Cobas et al.   CHEMOSPHERE

GammaProteobacteria as a potential bioindicator of a multiple contamination by polycyclic aromatic hydrocarbons (PAHs) in agricultural soils

(2013) Maïté Niepceron et al.   ENVIRONMENTAL POLLUTION

Identification of soil bacteria able to degrade phenanthrene bound to a hydrophobic sorbent in situ

(2013) Raïssa Kom Regonne et al.   ENVIRONMENTAL POLLUTION

Impact of Mycelia on the Accessibility of Fluorene to PAH-Degrading Bacteria

(2013) Susan Schamfuß et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Bioremediation of PAH-contaminated soil with fungi – From laboratory to field scale

(2013) Erika Winquist et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Successful bioremediation of an aged and heavily contaminated soil using a microbial/plant combination strategy

(2013) Yang Xu et al.   JOURNAL OF HAZARDOUS MATERIALS

ITS1 versus ITS2 as DNA metabarcodes for fungi

(2013) R. Blaalid et al.   Molecular Ecology Resources

Fungal and bacterial microbial community assessment during bioremediation assays in an aged creosote-polluted soil

(2013) S. Lladó et al.   SOIL BIOLOGY & BIOCHEMISTRY

Bioremediation of high molecular weight polyaromatic hydrocarbons co-contaminated with metals in liquid and soil slurries by metal tolerant PAHs degrading bacterial consortium

(2012) Palanisami Thavamani et al.   BIODEGRADATION

Bioaugmentation of Sewage Sludge with Trametes versicolor in Solid-Phase Biopiles Produces Degradation of Pharmaceuticals and Affects Microbial Communities

(2012) Carlos E. Rodríguez-Rodríguez et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Mycelia Promote Active Transport and Spatial Dispersion of Polycyclic Aromatic Hydrocarbons

(2012) Shoko Furuno et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

Isolation of novel benzo[a]anthracene-degrading microorganisms and continuous bioremediation in an expanded-bed bioreactor

(2011) E. Rosales et al.   BIOPROCESS AND BIOSYSTEMS ENGINEERING

Stable-isotope probing of the polycyclic aromatic hydrocarbon-degrading bacterial guild in a contaminated soil

(2011) Maiysha D. Jones et al.   ENVIRONMENTAL MICROBIOLOGY

Betaproteobacteria dominance and diversity shifts in the bacterial community of a PAH-contaminated soil exposed to phenanthrene

(2011) Florence Martin et al.   ENVIRONMENTAL POLLUTION

Identification of anthracene degraders in leachate-contaminated aquifer using stable isotope probing

(2011) Shuying Zhang et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Biodegradation of anthracene and benz[a]anthracene by two Fusarium solani strains isolated from mangrove sediments

(2010) Yi-Rui Wu et al.   BIORESOURCE TECHNOLOGY

A critical review of the application of white rot fungus to environmental pollution control

(2010) Dawen Gao et al.   CRITICAL REVIEWS IN BIOTECHNOLOGY

Root exudates modify bacterial diversity of phenanthrene degraders in PAH-polluted soil but not phenanthrene degradation rates

(2010) Aurélie Cébron et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial communities to mitigate contamination of PAHs in soil—possibilities and challenges: a review

(2010) F. Fernández-Luqueño et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Benzo[a]pyrene removal by axenic- and co-cultures of some bacterial and fungal strains

(2010) C. Machín-Ramírez et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Tolerance and growth of 11 Trichoderma strains to crude oil, naphthalene, phenanthrene and benzo[a]pyrene

(2010) Rosalba Argumedo-Delira et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Effect of soil bacteria on the ability of polycyclic aromatic hydrocarbons (PAHs) removal by Trametes versicolor and Irpex lacteus from contaminated soil

(2010) Eduard Borràs et al.   SOIL BIOLOGY & BIOCHEMISTRY

Direct Link between Toluene Degradation in Contaminated-Site Microcosms and a Polaromonas Strain

(2009) W. Sun et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Sorption of Polycyclic Aromatic Hydrocarbons to Carbohydrates and Lipids of Ryegrass Root and Implications for a Sorption Prediction Model

(2009) Ming Zhang et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Biodegradation aspects of Polycyclic Aromatic Hydrocarbons (PAHs): A review

(2009) A.K. Haritash et al.   JOURNAL OF HAZARDOUS MATERIALS

A pyrene-degrading consortium from deep-sea sediment of the West Pacific and its key memberCycloclasticussp. P1

(2008) Baojiang Wang et al.   ENVIRONMENTAL MICROBIOLOGY

Effects of Enrichment with Salicylate on Bacterial Selection and PAH Mineralization in a Microbial Community from a Bioreactor Treating Contaminated Soil

(2008) Sabrina N. Powell et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY