The preservation of ancient DNA in archaeological fish bone

Human auditory ossicles as an alternative optimal source of ancient DNA

(2020) Kendra Ann Sirak et al.   GENOME RESEARCH

A systematic investigation of human DNA preservation in medieval skeletons

(2020) Cody Parker et al.   Scientific Reports

Petrous bone diagenesis: a multi-analytical approach

(2019) Ioannis Kontopoulos et al.   PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY

An environmental (pre)history of European fishing: past and future archaeological contributions to sustainable fisheries

(2019) James H. Barrett   JOURNAL OF FISH BIOLOGY

Tracking Five Millennia of Horse Management with Extensive Ancient Genome Time Series

(2019) Antoine Fages et al.   CELL

Not a limitless resource: ethics and guidelines for destructive sampling of archaeofaunal remains

(2019) Albína Hulda Pálsdóttir et al.   Royal Society Open Science

Hybridization Enrichment to Improve Forensic Mitochondrial DNA Analysis of Highly Degraded Human Remains

(2019) Jennifer M. Young et al.   Frontiers in Ecology and Evolution

A ligation-based single-stranded library preparation method to analyze cell-free DNA and synthetic oligos

(2019) Christopher J. Troll et al.   BMC GENOMICS

Ecological globalisation, serial depletion and the medieval trade of walrus rostra

(2019) James H. Barrett et al.   QUATERNARY SCIENCE REVIEWS

Ancient Human Genomics: The First Decade

(2018) Pontus Skoglund et al.   Annual Review of Genomics and Human Genetics

A stainless-steel mortar, pestle and sleeve design for the efficient fragmentation of ancient bone

(2018) Agata T Gondek et al.   BIOTECHNIQUES

Optimized DNA sampling of ancient bones using Computed Tomography scans

(2018) Federica Alberti et al.   Molecular Ecology Resources

137 ancient human genomes from across the Eurasian steppes

(2018) Peter de Barros Damgaard et al.   NATURE

Diagenesis of archaeological bone and tooth

(2018) Christopher Kendall et al.   PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY

An efficient and reliable DNA-based sex identification method for archaeological Pacific salmonid (Oncorhynchus spp.) remains

(2018) Thomas C. A. Royle et al.   PLoS One

Increased mitochondrial DNA diversity in ancient Columbia River basin Chinook salmon Oncorhynchus tshawytscha

(2018) Bobbi M. Johnson et al.   PLoS One

Subsistence practices, past biodiversity, and anthropogenic impacts revealed by New Zealand-wide ancient DNA survey

(2018) Frederik V. Seersholm et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A comprehensive genomic history of extinct and living elephants

(2018) Eleftheria Palkopoulou et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The genomic history of southeastern Europe

(2018) Iain Mathieson et al.   NATURE

The Beaker phenomenon and the genomic transformation of northwest Europe

(2018) Iñigo Olalde et al.   NATURE

Dogs accompanied humans during the Neolithic expansion into Europe

(2018) Morgane Ollivier et al.   Biology Letters

Sexing Viking Age horses from burial and non-burial sites in Iceland using ancient DNA

(2018) Heidi M. Nistelberger et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

Ancient DNA: The quest for the best

(2018) Eva-Maria Geigl et al.   Molecular Ecology Resources

Trans-oceanic genomic divergence of Atlantic cod ecotypes is associated with large inversions

(2017) P R Berg et al.   HEREDITY

Ancient DNA analysis of cyprinid remains from the Mesolithic-Neolithic Danube Gorges reveals an extirpated fish species Rutilus frisii (Nordmann, 1840)

(2017) Ivana Živaljević et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

Ancient DNA reveals the Arctic origin of Viking Age cod from Haithabu, Germany

(2017) Bastiaan Star et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing

(2017) Sarah Siu Tze Mak et al.   GigaScience

Reconstruction of the historical distribution of sturgeons (Acipenseridae) in the eastern North Atlantic based on ancient DNA and bone morphology of archaeological remains: implications for conservation and restoration programmes

(2016) Elena A. Nikulina et al.   DIVERSITY AND DISTRIBUTIONS

Tropical ancient DNA from bulk archaeological fish bone reveals the subsistence practices of a historic coastal community in southwest Madagascar

(2016) Alicia Grealy et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

Combining bleach and mild predigestion improves ancient DNA recovery from bones

(2016) Sanne Boessenkool et al.   Molecular Ecology Resources

Three chromosomal rearrangements promote genomic divergence between migratory and stationary ecotypes of Atlantic cod

(2016) Paul R. Berg et al.   Scientific Reports

The Effects of Paleoclimatic Events on Mediterranean Trout: Preliminary Evidences from Ancient DNA

(2016) Andrea Splendiani et al.   PLoS One

Reducing microbial and human contamination in DNA extractions from ancient bones and teeth

(2015) Petra Korlević et al.   BIOTECHNIQUES

Genome-wide ancestry of 17th-century enslaved Africans from the Caribbean

(2015) Hannes Schroeder et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Post-glacial dispersal patterns of Northern pike inferred from an 8800 year old pike (Esox cf. lucius) skull from interior Alaska

(2015) Matthew J. Wooller et al.   QUATERNARY SCIENCE REVIEWS

Improving access to endogenous DNA in ancient bones and teeth

(2015) Peter B. Damgaard et al.   Scientific Reports

The globalization of naval provisioning: ancient DNA and stable isotope analyses of stored cod from the wreck of the Mary Rose, AD 1545

(2015) William F. Hutchinson et al.   Royal Society Open Science

Optimal Ancient DNA Yields from the Inner Ear Part of the Human Petrous Bone

(2015) Ron Pinhasi et al.   PLoS One

The future of ancient DNA: Technical advances and conceptual shifts

(2014) Michael Hofreiter et al.   BIOESSAYS

Characterization of ancient and modern genomes by SNP detection and phylogenomic and metagenomic analysis using PALEOMIX

(2014) Mikkel Schubert et al.   Nature Protocols

Historical DNA reveals the demographic history of Atlantic cod (Gadus morhua) in medieval and early modern Iceland

(2014) G. A. Olafsdottir et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Genome flux and stasis in a five millennium transect of European prehistory

(2014) Cristina Gamba et al.   Nature Communications

mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters

(2013) Hákon Jónsson et al.   BIOINFORMATICS

Evaluating the efficacy of various thermo-stable polymerases against co-extracted PCR inhibitors in ancient DNA samples

(2013) Cara Monroe et al.   FORENSIC SCIENCE INTERNATIONAL

Cervids in a dynamic northern landscape: Holocene changes in the relative abundance of moose and red deer at the limits of their distributions

(2013) Jørgen Rosvold et al.   HOLOCENE

Complete mitochondrial genome sequence of a Middle Pleistocene cave bear reconstructed from ultrashort DNA fragments

(2013) J. Dabney et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Using ancient DNA identification and osteometric measures of archaeological Pacific salmon vertebrae for reconstructing salmon fisheries and site seasonality at Dionisio Point, British Columbia

(2012) Colin Grier et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

High Potential for Using DNA from Ancient Herring Bones to Inform Modern Fisheries Management and Conservation

(2012) Camilla F. Speller et al.   PLoS One

DNA in ancient bone – Where is it located and how should we extract it?

(2011) Paula F. Campos et al.   ANNALS OF ANATOMY-ANATOMISCHER ANZEIGER

Fish bone chemistry and ultrastructure: implications for taphonomy and stable isotope analysis

(2011) Paul Szpak   JOURNAL OF ARCHAEOLOGICAL SCIENCE

The genome sequence of Atlantic cod reveals a unique immune system

(2011) Bastiaan Star et al.   NATURE

Double indexing overcomes inaccuracies in multiplex sequencing on the Illumina platform

(2011) Martin Kircher et al.   NUCLEIC ACIDS RESEARCH

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

A comparative view on mechanisms and functions of skeletal remodelling in teleost fish, with special emphasis on osteoclasts and their function

(2009) P. Eckhard Witten et al.   BIOLOGICAL REVIEWS

Ancient mitochondrial DNA analyses of Iberian sturgeons

(2009) A. Ludwig et al.   JOURNAL OF APPLIED ICHTHYOLOGY

Environment and excavation: Pre-lab impacts on ancient DNA analyses

(2008) Ruth Bollongino et al.   COMPTES RENDUS PALEVOL

Historical presence of the sturgeon Acipenser sturio in the Rhône basin determined by the analysis of ancient DNA cytochrome b sequences

(2008) Marie Pagès et al.   CONSERVATION GENETICS