Gut microbiome of the White Sea fish revealed by 16S rRNA metabarcoding

The strains of bioluminescent bacteria isolated from the White Sea finfishes: genera Photobacterium, Aliivibrio, Vibrio, Shewanella, and first luminous Kosakonia

(2020) O. Burtseva et al.   JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY

Gut Microbiota and Energy Homeostasis in Fish

(2019) Robyn Lisa Butt et al.   Frontiers in Endocrinology

Eukaryotic Sequences in the 16SrRNA Metagenomic Dataset of Algal-bacterial Consortia of the White Sea Coastal Zone

(2019) Konstantin Chekanov et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Closely-related Photobacterium strains comprise the majority of bacteria in the gut of migrating Atlantic cod (Gadus morhua)

(2019) Typhaine Le Doujet et al.   Microbiome

High-throughput Sequencing of Pooled Samples to Determine Community-Level Microbiome Diversity

(2019) Kathryn J. Ray et al.   ANNALS OF EPIDEMIOLOGY

Structure and diversity of the bacterial community of an Arctic estuarine system (Kandalaksha Bay) subject to intense tidal currents

(2019) Susanna Gorrasi et al.   JOURNAL OF MARINE SYSTEMS

Natural Communities of Carotenogenic Chlorophyte Haematococcus lacustris and Bacteria from the White Sea Coastal Rock Ponds

(2019) Anna Kublanovskaya et al.   MICROBIAL ECOLOGY

Gut metabolome meets microbiome: A methodological perspective to understand the relationship between host and microbe

(2018) Santosh Lamichhane et al.   METHODS

The Gut Microbiota of Marine Fish

(2018) Sian Egerton et al.   Frontiers in Microbiology

Sharp water column stratification with an extremely dense microbial population in a small meromictic lake, Trekhtzvetnoe

(2018) Alexander S. Savvichev et al.   ENVIRONMENTAL MICROBIOLOGY

Fish Gut Microbiome: Current Approaches and Future Perspectives

(2018) Chandni Talwar et al.   INDIAN JOURNAL OF MICROBIOLOGY

Cyanobacterial diversity in the algal–bacterial consortia from Subarctic regions: new insights from the rock baths at White Sea Coast

(2018) A. Kublanovskaya et al.   HYDROBIOLOGIA

Fish intestinal microbiome: diversity and symbiosis unravelled by metagenomics

(2017) A.M. Tarnecki et al.   JOURNAL OF APPLIED MICROBIOLOGY

Photosynthetic Picoeukaryotes in the Land-Fast Ice of the White Sea, Russia

(2017) T. A. Belevich et al.   MICROBIAL ECOLOGY

Lux-operon of the marine psychrophilic bacterium Aliivibrio logei: a comparative analysis of the LuxR1/LuxR2 regulatory activity in Escherichia coli cells

(2016) Svetlana A. Khrulnova et al.   MICROBIOLOGY-SGM

The gut microbiome and degradation enzyme activity of wild freshwater fishes influenced by their trophic levels

(2016) Han Liu et al.   Scientific Reports

Relationship between phylogenetic and nutritional diversity in Arctic (Kandalaksha Bay) seawater planktonic bacteria

(2015) Chiara Pesciaroli et al.   ANNALS OF MICROBIOLOGY

A new view of the fish gut microbiome: Advances from next-generation sequencing

(2015) Mahdi Ghanbari et al.   AQUACULTURE

Effect of dietary components on the gut microbiota of aquatic animals. A never-ending story?

(2015) E. Ringø et al.   AQUACULTURE NUTRITION

Metagenomic analyses of white sea picoalgae: First data

(2015) T. A. Belevich et al.   BIOCHEMISTRY-MOSCOW

Selection in the host structures the microbiota associated with developing cod larvae (Gadus morhua)

(2015) Ingrid Bakke et al.   ENVIRONMENTAL MICROBIOLOGY

The biogeography of the atlantic salmon (Salmo salar) gut microbiome

(2015) Martin S Llewellyn et al.   ISME Journal

Study of microbial communities in redox zone of meromictic lakes isolated from the White Sea using spectral and molecular methods

(2015) E.D. Krasnova et al.   JOURNAL OF THE MARINE BIOLOGICAL ASSOCIATION OF THE UNITED KINGDOM

Comparison of the gut microbiomes of 12 bony fish and 3 shark species

(2015) CE Givens et al.   MARINE ECOLOGY PROGRESS SERIES

Community assembly of a euryhaline fish microbiome during salinity acclimation

(2015) Victor T. Schmidt et al.   MOLECULAR ECOLOGY

Impact of Fishmeal Replacement in Diets for Gilthead Sea Bream (Sparus aurata) on the Gastrointestinal Microbiota Determined by Pyrosequencing the 16S rRNA Gene

(2015) G. Estruch et al.   PLoS One

Comparison of the gut microbiomes of 12 bony fish and 3 shark species

(2015) CE Givens et al.   MARINE ECOLOGY PROGRESS SERIES

Bacterial community structure of a coastal area in Kandalaksha Bay, White Sea, Russia: possible relation to tidal hydrodynamics

(2014) Chiara Pesciaroli et al.   ANNALS OF MICROBIOLOGY

VAMPS: a website for visualization and analysis of microbial population structures

(2014) Susan M Huse et al.   BMC BIOINFORMATICS

Do the intestinal microbiotas differ between paddlefish (Polyodon spathala) and bighead carp (Aristichthys nobilis) reared in the same pond?

(2014) X.M. Li et al.   JOURNAL OF APPLIED MICROBIOLOGY

Comparative Analysis of the Intestinal Bacterial Communities in Different Species of Carp by Pyrosequencing

(2014) Tongtong Li et al.   MICROBIAL ECOLOGY

Intestinal microbiota in fishes: what's known and what's not

(2014) Kendall D. Clements et al.   MOLECULAR ECOLOGY

Gut microbiota–generated metabolites in animal health and disease

(2014) Won-Jae Lee et al.   Nature Chemical Biology

Teleost microbiomes: the state of the art in their characterization, manipulation and importance in aquaculture and fisheries

(2014) Martin S. Llewellyn et al.   Frontiers in Microbiology

Next generation sequencing shows high variation of the intestinal microbial species composition in Atlantic cod caught at a single location

(2013) Bastiaan Star et al.   BMC MICROBIOLOGY

Environmental and ecological factors that shape the gut bacterial communities of fish: a meta-analysis

(2012) KAREN E. SULLAM et al.   MOLECULAR ECOLOGY

Human gut microbiome viewed across age and geography

(2012) Tanya Yatsunenko et al.   NATURE

Composition, Diversity, and Origin of the Bacterial Community in Grass Carp Intestine

(2012) Shangong Wu et al.   PLoS One

Host-Gut Microbiota Metabolic Interactions

(2012) J. K. Nicholson et al.   SCIENCE

Influence of the diet on the microbial diversity of faecal and gastrointestinal contents in gilthead sea bream (Sparus aurata) and intestinal contents in goldfish (Carassius auratus)

(2011) Flávia Cristina de Paula Silva et al.   FEMS MICROBIOLOGY ECOLOGY

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

Unravelling the effects of the environment and host genotype on the gut microbiome

(2011) Aymé Spor et al.   NATURE REVIEWS MICROBIOLOGY

Temperature preferences of bacteria isolated from seawater collected in Kandalaksha Bay, White Sea, Russia

(2011) Chiara Pesciaroli et al.   POLAR BIOLOGY

Bacterial bioluminescence as a lure for marine zooplankton and fish

(2011) M. Zarubin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

“Quorum sensing” regulation and the structure of lux the operon in marine bacteria Aliivibrio logei

(2011) S. A. Khrulnova et al.   RUSSIAN JOURNAL OF GENETICS

Examining the global distribution of dominant archaeal populations in soil

(2010) Scott T Bates et al.   ISME Journal

Biodiversity of arctic marine fishes: taxonomy and zoogeography

(2010) Catherine W. Mecklenburg et al.   Marine Biodiversity

Diversification of the gut symbiont Lactobacillus reuteri as a result of host-driven evolution

(2009) Phaik Lyn Oh et al.   ISME Journal

Physiological and emission characteristics of the luminescent bacterium Photobacterium Phosphoreum from the White Sea

(2009) V. V. Kuts et al.   MICROBIOLOGY

Multi-gene analysis reveals previously unrecognized phylogenetic diversity in Aliivibrio

(2009) Jennifer C. Ast et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY