Genome sequencing and phylogenetic analysis of allotetraploid Salix matsudana Koidz

ppsPCP: A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline

(2019) Muhammad Tahir ul Qamar et al.   BIOINFORMATICS

Systemic signalling through translationally controlled tumour protein controls lateral root formation in Arabidopsis

(2019) Rémi Branco et al.   JOURNAL OF EXPERIMENTAL BOTANY

Uneven selection pressure accelerating divergence of Populus and Salix

(2019) Jing Hou et al.   Horticulture Research

Canu: scalable and accurate long-read assembly via adaptivek-mer weighting and repeat separation

(2017) Sergey Koren et al.   GENOME RESEARCH

Transcriptomic Response of Purple Willow (Salix purpurea) to Arsenic Stress

(2017) Aymeric Yanitch et al.   Frontiers in Plant Science

The genetic architecture of growth traits in Salix matsudana under salt stress

(2017) Jian Zhang et al.   Horticulture Research

Major Chromosomal Rearrangements Distinguish Willow and Poplar After the Ancestral “Salicoid” Genome Duplication

(2016) Jing Hou et al.   Genome Biology and Evolution

Phased diploid genome assembly with single-molecule real-time sequencing

(2016) Chen-Shan Chin et al.   NATURE METHODS

Using intron position conservation for homology-based gene prediction

(2016) Jens Keilwagen et al.   NUCLEIC ACIDS RESEARCH

Heatmapper: web-enabled heat mapping for all

(2016) Sasha Babicki et al.   NUCLEIC ACIDS RESEARCH

A High-Density Genetic Map of Tetraploid Salix matsudana Using Specific Length Amplified Fragment Sequencing (SLAF-seq)

(2016) Jian Zhang et al.   PLoS One

Phylogeny of Salix subgenus Salix s.l. (Salicaceae): delimitation, biogeography, and reticulate evolution

(2015) Jie Wu et al.   BMC EVOLUTIONARY BIOLOGY

Genome-wide transcriptional and physiological responses to drought stress in leaves and roots of two willow genotypes

(2015) Pascal Pucholt et al.   BMC PLANT BIOLOGY

The polyploidy and its key role in plant breeding

(2015) Mariana Cansian Sattler et al.   PLANTA

Early selection of novel triploid hybrids of shrub willow with improved biomass yield relative to diploids

(2014) Michelle J Serapiglia et al.   BMC PLANT BIOLOGY

The willow genome and divergent evolution from poplar after the common genome duplication

(2014) Xiaogang Dai et al.   CELL RESEARCH

Comparative Proteomic Analysis of Responses to Salt Stress in Chinese Willow (Salix matsudana Koidz)

(2013) Guirong Qiao et al.   PLANT MOLECULAR BIOLOGY REPORTER

The origin of the B-genome of bread wheat (Triticum aestivum L.)

(2013) N. Haider   RUSSIAN JOURNAL OF GENETICS

Examining the salt tolerance of willow (Salix spp.) bioenergy species for use on salt-affected agricultural lands

(2011) R. D. Hangs et al.   CANADIAN JOURNAL OF PLANT SCIENCE

The UniProt-GO Annotation database in 2011

(2011) E. C. Dimmer et al.   NUCLEIC ACIDS RESEARCH

MITE-Hunter: a program for discovering miniature inverted-repeat transposable elements from genomic sequences

(2010) Y. Han et al.   NUCLEIC ACIDS RESEARCH

CDD: a Conserved Domain Database for the functional annotation of proteins

(2010) A. Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

Treatment of landfill leachate by irrigation of willow coppice – Plant response and treatment efficiency

(2009) Pär Aronsson et al.   ENVIRONMENTAL POLLUTION

Dating the origins of polyploidy events

(2009) Jeff J. Doyle et al.   NEW PHYTOLOGIST

Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

(2008) Brian J Haas et al.   GENOME BIOLOGY