Sensitive universal detection of blood parasites by selective pathogen-DNA enrichment and deep amplicon sequencing

Sensitive, Highly Multiplexed Sequencing of Microhaplotypes From the Plasmodium falciparum Heterozygome

(2020) Sofonias K Tessema et al.   JOURNAL OF INFECTIOUS DISEASES

Targeted Inhibition of Plasmodium falciparum Calcium-Dependent Protein Kinase 1 with a Constrained J Domain-Derived Disruptor Peptide

(2019) Briana R. Flaherty et al.   ACS Infectious Diseases

Performance Outcomes from Africa-Based Malaria Diagnostic Competency Assessment Courses

(2019) Matt Worges et al.   AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE

Ribosomal and non-ribosomal PCR targets for the detection of low-density and mixed malaria infections

(2019) Lara Cotta Amaral et al.   MALARIA JOURNAL

Diagnostic Identification and Differentiation of Microfilariae

(2019) Blaine A. Mathison et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Detection of low-density Plasmodium falciparum infections using amplicon deep sequencing

(2019) Angela M. Early et al.   MALARIA JOURNAL

Clinical Metagenomic Sequencing for Diagnosis of Meningitis and Encephalitis

(2019) Michael R. Wilson et al.   NEW ENGLAND JOURNAL OF MEDICINE

Metagenomic next-generation sequencing of samples from pediatric febrile illness in Tororo, Uganda

(2019) Akshaya Ramesh et al.   PLoS One

Next-generation sequencing specifies Angiostrongylus eosinophilic meningoencephalitis in infants

(2019) Mei Xie et al.   MEDICINE

The diverse roles of DNA methylation in mammalian development and disease

(2019) Maxim V. C. Greenberg et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

A global genotyping survey of Strongyloides stercoralis and Strongyloides fuelleborni using deep amplicon sequencing

(2019) Joel L. N. Barratt et al.   PLoS Neglected Tropical Diseases

A novel metabarcoding diagnostic tool to explore protozoan haemoparasite diversity in mammals: a proof-of-concept study using canines from the tropics

(2019) Lucas G. Huggins et al.   Scientific Reports

Pathogen Genomics in Public Health

(2019) Gregory L. Armstrong et al.   NEW ENGLAND JOURNAL OF MEDICINE

Unbiased Metagenomic Sequencing for Pediatric Meningitis in Bangladesh Reveals Neuroinvasive Chikungunya Virus Outbreak and Other Unrealized Pathogens

(2019) Senjuti Saha et al.   mBio

Comparison of PCR Methods for Onchocerca volvulus Detection in Skin Snip Biopsies from the Tshopo Province, Democratic Republic of the Congo

(2018) Jessica L. Prince-Guerra et al.   AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE

Next-Generation Sequencing and Bioinformatics Protocol for Malaria Drug Resistance Marker Surveillance

(2018) Eldin Talundzic et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Next-generation sequencing technologies and their application to the study and control of bacterial infections

(2018) J. Besser et al.   CLINICAL MICROBIOLOGY AND INFECTION

Diversity of Entamoeba spp. in African great apes and humans: an insight from Illumina MiSeq high-throughput sequencing

(2018) Klára Vlčková et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

Next-generation sequencing diagnostics of bacteremia in sepsis (Next GeneSiS-Trial)

(2018) Thorsten Brenner et al.   MEDICINE

Metabarcoding analysis of strongylid nematode diversity in two sympatric primate species

(2018) Barbora Pafčo et al.   Scientific Reports

Chronic Meningitis Investigated via Metagenomic Next-Generation Sequencing

(2018) Michael R. Wilson et al.   JAMA Neurology

Next generation sequencing reveals widespread trypanosome diversity and polyparasitism in marsupials from Western Australia

(2018) Crystal Cooper et al.   International Journal for Parasitology-Parasites and Wildlife

Restriction enzyme digestion of host DNA enhances universal detection of parasitic pathogens in blood via targeted amplicon deep sequencing

(2018) Briana R. Flaherty et al.   Microbiome

A multiplex assay for the sensitive detection and quantification of male and female Plasmodium falciparum gametocytes

(2018) Lisette Meerstein-Kessel et al.   MALARIA JOURNAL

A high-throughput sequencing assay to comprehensively detect and characterize unicellular eukaryotes and helminths from biological and environmental samples

(2018) Matthew V. Cannon et al.   Microbiome

Species and genotype diversity of Plasmodium in malaria patients from Gabon analysed by next generation sequencing

(2017) Albert Lalremruata et al.   MALARIA JOURNAL

The evolution of trypanosomatid taxonomy

(2017) Alexa Kaufer et al.   Parasites & Vectors

A Clinical and Epidemiological Investigation of the First Reported Human Infection With the Zoonotic ParasiteTrypanosoma evansiin Southeast Asia

(2016) Nguyen Van Vinh Chau et al.   CLINICAL INFECTIOUS DISEASES

Novel technologies applied to the nucleotide sequencing and comparative sequence analysis of the genomes of infectious agents in veterinary medicine

(2016) F. GRANBERG et al.   REVUE SCIENTIFIQUE ET TECHNIQUE-OFFICE INTERNATIONAL DES EPIZOOTIES

Next-generation sequencing diagnostics of bacteremia in septic patients

(2016) Silke Grumaz et al.   Genome Medicine

High-throughput sequencing in veterinary infection biology and diagnostics

(2016) S. BELAK et al.   REVUE SCIENTIFIQUE ET TECHNIQUE-OFFICE INTERNATIONAL DES EPIZOOTIES

High Prevalence of Mansonella perstans Filariasis in Rural Senegal

(2015) Hubert Bassene et al.   AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE

DiagnosingBalamuthia mandrillarisEncephalitis With Metagenomic Deep Sequencing

(2015) Michael R. Wilson et al.   ANNALS OF NEUROLOGY

Ultra-Sensitive Detection of Plasmodium falciparum by Amplification of Multi-Copy Subtelomeric Targets

(2015) Natalie Hofmann et al.   PLOS MEDICINE

Atypical Human Infections by Animal Trypanosomes

(2013) Philippe Truc et al.   PLoS Neglected Tropical Diseases

A tale of three next generation sequencing platforms: comparison of Ion torrent, pacific biosciences and illumina MiSeq sequencers

(2012) Michael Quail et al.   BMC GENOMICS

Identification of Leishmania spp. by Molecular Amplification and DNA Sequencing Analysis of a Fragment of rRNA Internal Transcribed Spacer 2

(2011) Marcos E. de Almeida et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Rapid Molecular Assays for Specific Detection and Quantitation of Loa loa Microfilaremia

(2011) Doran L. Fink et al.   PLoS Neglected Tropical Diseases

Evaluation of genomic high-throughput sequencing data generated on Illumina HiSeq and Genome Analyzer systems

(2011) André E Minoche et al.   GENOME BIOLOGY

Filarial infections in travelers and immigrants

(2008) Amy D. Klion   Current Infectious Disease Reports