Culturing of “Unculturable” Subsurface Microbes: Natural Organic Carbon Source Fuels the Growth of Diverse and Distinct Bacteria From Groundwater

Nutrient loading diminishes the dissolved organic carbon drawdown capacity of seagrass ecosystems

(2020) Songlin Liu et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Stagnimonas aquatica gen. nov., sp. nov., a new member of the family Nevskiaceae isolated from a freshwater mesocosm

(2019) Shih-Yi Sheu et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

The ‘1% culturability paradigm’ needs to be carefully defined

(2019) Adam C. Martiny   ISME Journal

High proportions of bacteria and archaea across most biomes remain uncultured

(2019) Andrew D. Steen et al.   ISME Journal

Cultivation and functional characterization of 79 planctomycetes uncovers their unique biology

(2019) Sandra Wiegand et al.   Nature Microbiology

Microbial Interactions With Dissolved Organic Matter Drive Carbon Dynamics and Community Succession

(2018) Xiaoqin Wu et al.   Frontiers in Microbiology

Phylogenetically Novel Uncultured Microbial Cells Dominate Earth Microbiomes

(2018) Karen G. Lloyd et al.   mSystems

Effective Soil Extraction Method for Cultivating Previously Uncultured Soil Bacteria

(2018) Tuan Manh Nguyen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Trending topics and open questions in anaerobic ammonium oxidation

(2018) Stijn H Peeters et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Ecophysiology of Freshwater Verrucomicrobia Inferred from Metagenome-Assembled Genomes

(2017) Shaomei He et al.   mSphere

Artificial Seawater Media Facilitate Cultivating Members of the Microbial Majority from the Gulf of Mexico

(2016) Michael W. Henson et al.   mSphere

Effects of carbon sources on the enrichment of halophilic polyhydroxyalkanoate-storing mixed microbial culture in an aerobic dynamic feeding process

(2016) You-Wei Cui et al.   Scientific Reports

Ultrasonication as a rapid and high yield DNA extraction method for bacterial gene quantification by NanoGene assay

(2015) Xiaofang Wang et al.   BIOTECHNOLOGY AND BIOPROCESS ENGINEERING

High Diversity of Culturable Prokaryotes in a Lithifying Hypersaline Microbial Mat

(2015) Stefan Spring et al.   GEOMICROBIOLOGY JOURNAL

Cautionary tale of using 16S rRNA gene sequence similarity values in identification of human-associated bacterial species

(2015) Morgane Rossi-Tamisier et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Mining the microbial dark matter

(2015) Corie Lok   NATURE

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Description of Fimbriimonas ginsengisoli gen. nov., sp. nov. within the Fimbriimonadia class nov., of the phylum Armatimonadetes

(2012) Wan-Taek Im et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Global distribution and diversity of marine Verrucomicrobia

(2012) Sara Freitas et al.   ISME Journal

Metagenomic insights into chlorination effects on microbial antibiotic resistance in drinking water

(2012) Peng Shi et al.   WATER RESEARCH

Bringing Planctomycetes into pure culture

(2012) Olga M. Lage et al.   Frontiers in Microbiology

The under-recognized dominance of Verrucomicrobia in soil bacterial communities

(2011) Gaddy T. Bergmann et al.   SOIL BIOLOGY & BIOCHEMISTRY

Application of Molecular Techniques To Elucidate the Influence of Cellulosic Waste on the Bacterial Community Structure at a Simulated Low-Level-Radioactive-Waste Site

(2010) E. K. Field et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Isolation and Physiology of Bacteria from Contaminated Subsurface Sediments

(2010) A. Bollmann et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Use of Ichip for High-Throughput In Situ Cultivation of "Uncultivable" Microbial Species

(2010) D. Nichols et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Strategies for culture of ‘unculturable’ bacteria

(2010) Sonia R. Vartoukian et al.   FEMS MICROBIOLOGY LETTERS

Chthonomonas calidirosea gen. nov., sp. nov., an aerobic, pigmented, thermophilic micro-organism of a novel bacterial class, Chthonomonadetes classis nov., of the newly described phylum Armatimonadetes originally designated candidate division OP10

(2010) K. C.- Y. Lee et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Armatimonas rosea gen. nov., sp. nov., of a novel bacterial phylum, Armatimonadetes phyl. nov., formally called the candidate phylum OP10

(2010) H. Tamaki et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Culture-Dependent and Independent Analyses of the Microbial Communities Inhabiting the Giant Duckweed (Spirodela polyrrhiza) Rhizoplane and Isolation of a Variety of Rarely Cultivated Organisms within the Phylum Verrucomicrobia

(2010) Hiroaki Matsuzawa et al.   MICROBES AND ENVIRONMENTS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Cross-Kingdom Amplification Using Bacteria-Specific Primers: Complications for Studies of Coral Microbial Ecology

(2008) J. P. Galkiewicz et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY