The pineapple MADS-box gene family and the evolution of early monocot flower

Floral transcriptomes reveal gene networks in pineapple floral growth and fruit development

(2020) Lulu Wang et al.   Communications Biology

The water lily genome and the early evolution of flowering plants

(2019) Liangsheng Zhang et al.   NATURE

Dissecting the role of MADS-box genes in monocot floral development and diversity

(2018) Cindy Callens et al.   JOURNAL OF EXPERIMENTAL BOTANY

MIKCC-type MADS-box genes in Rosa chinensis: the remarkable expansion of ABCDE model genes and their roles in floral organogenesis

(2018) Jinyi Liu et al.   Horticulture Research

PGD: Pineapple Genomics Database

(2018) Huimin Xu et al.   Horticulture Research

Comprehensive tissue-specific transcriptome profiling of pineapple (Ananas comosus) and building an eFP-browser for further study

(2018) Qi Mao et al.   PeerJ

The Apostasia genome and the evolution of orchids

(2017) Guo-Qiang Zhang et al.   NATURE

The ABCs of flower development: mutational analysis of AP1 /FUL -like genes in rice provides evidence for a homeotic (A)-function in grasses

(2017) Feng Wu et al.   PLANT JOURNAL

De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds

(2017) Olga Dudchenko et al.   SCIENCE

The ancestral flower of angiosperms and its early diversification

(2017) Hervé Sauquet et al.   Nature Communications

Genome-Wide Identification and Expression Profiling of ATP-Binding Cassette (ABC) Transporter Gene Family in Pineapple (Ananas comosus (L.) Merr.) Reveal the Role of AcABCG38 in Pollen Development

(2017) Piaojuan Chen et al.   Frontiers in Plant Science

Genome-Wide Identification of Auxin Response Factor (ARF) Genes Family and its Tissue-Specific Prominent Expression in Pineapple (Ananas comosus)

(2017) Zhenxia Su et al.   Tropical Plant Biology

MADS-domain transcription factors and the floral quartet model of flower development: linking plant development and evolution

(2016) Günter Theißen et al.   DEVELOPMENT

Partial redundancy and functional specialization of E-class SEPALLATA genes in an early-diverging eudicot

(2016) Valerie L. Soza et al.   DEVELOPMENTAL BIOLOGY

BananaMaMADSTranscription Factors Are Necessary for Fruit Ripening and Molecular Tools to Promote Shelf-Life and Food Security

(2016) Tomer Elitzur et al.   PLANT PHYSIOLOGY

Sub-functionalization to ovule development following duplication of a floral organ identity gene

(2015) Kelsey D. Galimba et al.   DEVELOPMENTAL BIOLOGY

The pineapple genome and the evolution of CAM photosynthesis

(2015) Ray Ming et al.   NATURE GENETICS

Non-canonical structure, function and phylogeny of the BsisterMADS-box geneOsMADS30of rice (Oryza sativa)

(2015) Susanne Schilling et al.   PLANT JOURNAL

Flexibility in the structure of spiral flowers and its underlying mechanisms

(2015) Peipei Wang et al.   Nature Plants

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Role of the FUL–SHP network in the evolution of fruit morphology and function

(2014) Cristina Ferrándiz et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcriptional control of fleshy fruit development and ripening

(2014) Rumyana Karlova et al.   JOURNAL OF EXPERIMENTAL BOTANY

Expression of paralogous SEP-, FUL-, AG- and STK-like MADS-box genes in wild-type and peloric Phalaenopsis flowers

(2014) Roberta Acri-Nunes-Miranda et al.   Frontiers in Plant Science

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

OsMADS16 Genetically Interacts with OsMADS3 and OsMADS58 in Specifying Floral Patterning in Rice

(2013) Dapeng Yun et al.   Molecular Plant

Single-base resolution methylomes of tomato fruit development reveal epigenome modifications associated with ripening

(2013) Silin Zhong et al.   NATURE BIOTECHNOLOGY

Pfam: the protein families database

(2013) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

FLOWERING LOCUS C in monocots and the tandem origin of angiosperm-specific MADS-box genes

(2013) Philip Ruelens et al.   Nature Communications

Live and Let Die - The Bsister MADS-Box Gene OsMADS29 Controls the Degeneration of Cells in Maternal Tissues during Seed Development of Rice (Oryza sativa)

(2012) Xuelian Yang et al.   PLoS One

Functional Analysis of All AGAMOUS Subfamily Members in Rice Reveals Their Roles in Reproductive Organ Identity Determination and Meristem Determinacy

(2011) Ludovico Dreni et al.   PLANT CELL

Conserved differential expression of paralogous DEFICIENS- and GLOBOSA-like MADS-box genes in the flowers of Orchidaceae: refining the ‘orchid code’

(2011) Mariana Mondragón-Palomino et al.   PLANT JOURNAL

Evolutionary History of the Monocot Flower1

(2010) Margarita V. Remizowa et al.   ANNALS OF THE MISSOURI BOTANICAL GARDEN

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

(2009) M. N. Price et al.   MOLECULAR BIOLOGY AND EVOLUTION

TOMATO AGAMOUS-LIKE 1 is a component of the fruit ripening regulatory network

(2009) Maxim Itkin et al.   PLANT JOURNAL

Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)

(2009) Rongfeng Cui et al.   PLANT JOURNAL

Angiosperm genome comparisons reveal early polyploidy in the monocot lineage

(2009) H. Tang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Floral organ identity: 20 years of ABCs

(2009) Barry Causier et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Direct interaction of AGL24 and SOC1 integrates flowering signals in Arabidopsis

(2008) C. Liu et al.   DEVELOPMENT

Unequal Genetic Redundancy of Rice PISTILLATA Orthologs, OsMADS2 and OsMADS4, in Lodicule and Stamen Development

(2008) S.-G. Yao et al.   PLANT AND CELL PHYSIOLOGY