Freshwater mussels (Unionidae) brought into captivity exhibit up-regulation of genes involved in stress and energy metabolism

Unioverse: A phylogenomic resource for reconstructing the evolution of freshwater mussels (Bivalvia, Unionoida)

(2019) John M. Pfeiffer et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

RNA sequencing analysis of transcriptional change in the freshwater mussel Elliptio complanata after environmentally relevant sodium chloride exposure

(2017) Laura S. Robertson et al.   ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY

Salmon provides fast and bias-aware quantification of transcript expression

(2017) Rob Patro et al.   NATURE METHODS

Co-option of bacteriophage lysozyme genes by bivalve genomes

(2017) Qian Ren et al.   Open Biology

TransRate: reference-free quality assessment of de novo transcriptome assemblies

(2016) Richard Smith-Unna et al.   GENOME RESEARCH

Responses to elevated CO2 exposure in a freshwater mussel, Fusconaia flava

(2016) Jennifer D. Jeffrey et al.   JOURNAL OF COMPARATIVE PHYSIOLOGY B-BIOCHEMICAL SYSTEMIC AND ENVIRONMENTAL PHYSIOLOGY

IUCN Guidelines for Determining When and How Ex Situ Management Should Be Used in Species Conservation

(2016) Philip J.K. McGowan et al.   Conservation Letters

Disease and Disorders of Freshwater Unionid Mussels: A Brief Overview of Recent Studies

(2016) Francesca Carella et al.   Frontiers in Physiology

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

Captivity for Conservation? Zoos at a Crossroads

(2015) Jozef Keulartz   JOURNAL OF AGRICULTURAL & ENVIRONMENTAL ETHICS

Plastic and Evolved Responses to Global Change: What Can We Learn from Comparative Transcriptomics?: Table 1.

(2015) Melissa B. DeBiasse et al.   JOURNAL OF HEREDITY

Immune responses to infectious diseases in bivalves

(2015) Bassem Allam et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Evidence of oxidative stress in wild freshwater mussels (Lasmigona costata) exposed to urban-derived contaminants

(2014) Patricia L. Gillis et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Transcriptomic Profiling of Differential Responses to Drought in Two Freshwater Mussel Species, the Giant Floater Pyganodon grandis and the Pondhorn Uniomerus tetralasmus

(2014) Yupeng Luo et al.   PLoS One

Biodiversity on the brink: an assessment of conservation strategies for North American freshwater mussels

(2013) Wendell R. Haag et al.   HYDROBIOLOGIA

Defensin-based anti-infective strategies

(2013) Miriam Wilmes et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

Energy homeostasis as an integrative tool for assessing limits of environmental stress tolerance in aquatic invertebrates

(2012) Inna M. Sokolova et al.   MARINE ENVIRONMENTAL RESEARCH

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Rapid development of molecular resources for a freshwater mussel, Villosa lienosa (Bivalvia:Unionidae), using an RNA-seq-based approach

(2012) Ruijia Wang et al.   Freshwater Science

Suppression substractive hybridisation (SSH) and real time PCR reveal differential gene expression in the Pacific cupped oyster, Crassostrea gigas, challenged with Ostreid herpesvirus 1

(2011) T. Renault et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Assessing the benefits and risks of translocations in changing environments: a genetic perspective

(2011) Andrew R. Weeks et al.   Evolutionary Applications

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Big Defensins, a Diverse Family of Antimicrobial Peptides That Follows Different Patterns of Expression in Hemocytes of the Oyster Crassostrea gigas

(2011) Rafael D. Rosa et al.   PLoS One

Environmentally induced oxidative stress in aquatic animals

(2010) Volodymyr I. Lushchak   AQUATIC TOXICOLOGY

Stress: An inevitable component of animal translocation

(2010) Molly J. Dickens et al.   BIOLOGICAL CONSERVATION

Identification and expression of immune-related genes in hemocytes of soft-shell clams, Mya arenaria, challenged with Vibrio splendidus

(2010) Mebrahtu T. Araya et al.   FISH & SHELLFISH IMMUNOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Identification and expression of differentially expressed genes in the hard clam, Mercenaria mercenaria, in response to quahog parasite unknown (QPX)

(2009) Mickael Perrigault et al.   BMC GENOMICS

Recent Captive-Breeding Proposals and the Return of the Ark Concept to Global Species Conservation

(2009) ANDREW E. BOWKETT   CONSERVATION BIOLOGY

Infectious Diseases of Freshwater Mussels and Other Freshwater Bivalve Mollusks

(2009) JOHN M. GRIZZLE et al.   REVIEWS IN FISHERIES SCIENCE

Alternative oxidase: an inter-kingdom perspective on the function and regulation of this broadly distributed 'cyanide-resistant' terminal oxidase

(2008) Allison E. McDonald   FUNCTIONAL PLANT BIOLOGY

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH

Study of Diseases and the Immune System of Bivalves Using Molecular Biology and Genomics

(2008) Camino Gestal et al.   REVIEWS IN FISHERIES SCIENCE