Physiological and transcriptomic responses to N-deficiency and ammonium: Nitrate shift in Fugacium kawagutii (Symbiodiniaceae)

Symbiont population control by host-symbiont metabolic interaction in Symbiodiniaceae-cnidarian associations

(2020) Tingting Xiang et al.   Nature Communications

Genome Improvement and Core Gene Set Refinement of Fugacium kawagutii

(2020) Tangcheng Li et al.   Microorganisms

Transcriptomic Responses to Thermal Stress and Varied Phosphorus Conditions in Fugacium kawagutii

(2019) Senjie Lin et al.   Microorganisms

RNA-seq profiling of Fugacium kawagutii reveals strong responses in metabolic processes and symbiosis potential to deficiencies of iron and other trace metals

(2019) Tangcheng Li et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Comparative metatranscriptomic profiling and microRNA sequencing to reveal active metabolic pathways associated with a dinoflagellate bloom

(2019) Liying Yu et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Climate change promotes parasitism in a coral symbiosis

(2018) David M. Baker et al.   ISME Journal

Reference genes identification for normalization of qPCR under multiple stresses in Hordeum brevisubulatum

(2018) Lili Zhang et al.   Plant Methods

Quantitative Proteomics Reveals Common and Specific Responses of a Marine Diatom Thalassiosira pseudonana to Different Macronutrient Deficiencies

(2018) Xiao-Huang Chen et al.   Frontiers in Microbiology

Glucose-Induced Trophic Shift in an Endosymbiont Dinoflagellate with Physiological and Molecular Consequences

(2017) Tingting Xiang et al.   PLANT PHYSIOLOGY

Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown

(2016) Mihaela Pertea et al.   Nature Protocols

Review: Mechanisms of ammonium toxicity and the quest for tolerance

(2016) Raquel Esteban et al.   PLANT SCIENCE

Transcriptomic characterization of the enzymatic antioxidants FeSOD, MnSOD, APX and KatG in the dinoflagellate genus Symbiodinium

(2015) Thomas Krueger et al.   BMC EVOLUTIONARY BIOLOGY

Pluses and minuses of ammonium and nitrate uptake and assimilation by phytoplankton and implications for productivity and community composition, with emphasis on nitrogen-enriched conditions

(2015) Patricia M. Glibert et al.   LIMNOLOGY AND OCEANOGRAPHY

Symbiodiniumtranscriptome and global responses of cells to immediate changes in light intensity when grown under autotrophic or mixotrophic conditions

(2015) Tingting Xiang et al.   PLANT JOURNAL

Variability of Symbiodinium Communities in Waters, Sediments, and Corals of Thermally Distinct Reef Pools in American Samoa

(2015) Ross Cunning et al.   PLoS One

Antioxidant plasticity and thermal sensitivity in four types ofSymbiodiniumsp.

(2014) Thomas Krueger et al.   JOURNAL OF PHYCOLOGY

Identification and Validation of Reference Genes for Quantitative Real-Time PCR in Drosophila suzukii (Diptera: Drosophilidae)

(2014) Yifan Zhai et al.   PLoS One

Reference genes in real-time PCR

(2013) Bartłomiej Kozera et al.   JOURNAL OF APPLIED GENETICS

A single-cell view of ammonium assimilation in coral–dinoflagellate symbiosis

(2012) Mathieu Pernice et al.   ISME Journal

Cell Biology of Cnidarian-Dinoflagellate Symbiosis

(2012) S. K. Davy et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Transcriptomic response of the red tide dinoflagellate, Karenia brevis, to nitrogen and phosphorus depletion and addition

(2011) Jeanine S Morey et al.   BMC GENOMICS

KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases

(2011) Chen Xie et al.   NUCLEIC ACIDS RESEARCH

Genomic understanding of dinoflagellates

(2011) Senjie Lin   RESEARCH IN MICROBIOLOGY

Competition between uptake of ammonium and potassium in barley and Arabidopsis roots: molecular mechanisms and physiological consequences

(2010) F. t. Hoopen et al.   JOURNAL OF EXPERIMENTAL BOTANY

Metabolic interactions between algal symbionts and invertebrate hosts

(2008) DAVID YELLOWLEES et al.   PLANT CELL AND ENVIRONMENT