Prediction and validation of mouse meiosis-essential genes based on spermatogenesis proteome dynamics

Tesmin, Metallothionein-Like 5, is Required for Spermatogenesis in Mice†

(2020) Asami Oji et al.   BIOLOGY OF REPRODUCTION

Widespread Transcriptional Scanning in the Testis Modulates Gene Evolution Rates

(2020) Bo Xia et al.   CELL

Unified single-cell analysis of testis gene regulation and pathology in five mouse strains

(2019) Min Jung et al.   eLife

Characterization of germ cell differentiation in the male mouse through single-cell RNA sequencing

(2018) S. Lukassen et al.   Scientific Reports

Single-cell RNA-seq uncovers dynamic processes and critical regulators in mouse spermatogenesis

(2018) Yao Chen et al.   CELL RESEARCH

Isolating mitotic and meiotic germ cells from male mice by developmental synchronization, staging, and sorting

(2018) Katherine A. Romer et al.   DEVELOPMENTAL BIOLOGY

A Comprehensive Roadmap of Murine Spermatogenesis Defined by Single-Cell RNA-Seq

(2018) Christopher Daniel Green et al.   DEVELOPMENTAL CELL

The adult human testis transcriptional cell atlas

(2018) Jingtao Guo et al.   CELL RESEARCH

The Mammalian Spermatogenesis Single-Cell Transcriptome, from Spermatogonial Stem Cells to Spermatids

(2018) Brian P. Hermann et al.   Cell Reports

Comparative Sperm Proteomics in Mouse Species with Divergent Mating Systems

(2017) Alberto Vicens et al.   MOLECULAR BIOLOGY AND EVOLUTION

Proteomic Analysis of Pachytene Spermatocytes of Sterile Hybrid Male Mice

(2016) L. Wang et al.   BIOLOGY OF REPRODUCTION

The Perseus computational platform for comprehensive analysis of (prote)omics data

(2016) Stefka Tyanova et al.   NATURE METHODS

Genome-wide prediction and functional characterization of the genetic basis of autism spectrum disorder

(2016) Arjun Krishnan et al.   NATURE NEUROSCIENCE

Regulating the construction and demolition of the synaptonemal complex

(2016) Cori K Cahoon et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Enrichr: a comprehensive gene set enrichment analysis web server 2016 update

(2016) Maxim V. Kuleshov et al.   NUCLEIC ACIDS RESEARCH

Genome engineering uncovers 54 evolutionarily conserved and testis-enriched genes that are not required for male fertility in mice

(2016) Haruhiko Miyata et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Regulating the construction and demolition of the synaptonemal complex

(2016) Cori K Cahoon et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Unraveling the proteomic profile of mice testis during the initiation of meiosis

(2015) Binbin Shao et al.   Journal of Proteomics

NbClust: AnRPackage for Determining the Relevant Number of Clusters in a Data Set

(2015) Malika Charrad et al.   Journal of Statistical Software

Self-Organization of Meiotic Recombination Initiation: General Principles and Molecular Pathways

(2014) Scott Keeney et al.   Annual Review of Genetics

Optimized flow cytometry isolation of murine spermatocytes

(2014) Valeriya Gaysinskaya et al.   CYTOMETRY PART A

The Pyruvate Dehydrogenase Complexes: Structure-based Function and Regulation

(2014) Mulchand S. Patel et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ

(2014) Jürgen Cox et al.   MOLECULAR & CELLULAR PROTEOMICS

Generating genetically modified mice using CRISPR/Cas-mediated genome engineering

(2014) Hui Yang et al.   Nature Protocols

One-Step Generation of Mice Carrying Mutations in Multiple Genes by CRISPR/Cas-Mediated Genome Engineering

(2013) Haoyi Wang et al.   CELL

One-Step Generation of Mice Carrying Reporter and Conditional Alleles by CRISPR/Cas-Mediated Genome Engineering

(2013) Hui Yang et al.   CELL

Integrative Proteomic and Transcriptomic Analyses Reveal Multiple Post-transcriptional Regulatory Mechanisms of Mouse Spermatogenesis

(2013) Haiyun Gan et al.   MOLECULAR & CELLULAR PROTEOMICS

LIN28A Marks the Spermatogonial Progenitor Population and Regulates Its Cyclic Expansion

(2013) Papia Chakraborty et al.   STEM CELLS

The Expression Profile of the Major Mouse SPO11 Isoforms Indicates that SPO11  Introduces Double Strand Breaks and Suggests that SPO11  Has an Additional Role in Prophase in both Spermatocytes and Oocytes

(2010) M. A. Bellani et al.   MOLECULAR AND CELLULAR BIOLOGY

Universal sample preparation method for proteome analysis

(2009) Jacek R Wiśniewski et al.   NATURE METHODS

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Expression of Stimulated by Retinoic Acid Gene 8 (Stra8) in Spermatogenic Cells Induced by Retinoic Acid: An In Vivo Study in Vitamin A-Sufficient Postnatal Murine Testes1

(2008) Qing Zhou et al.   BIOLOGY OF REPRODUCTION

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY