4.5 Article

Thyroid Ultrasound Reports: Will the Thyroid Imaging, Reporting, and Data System Improve Natural Language Processing Capture of Critical Thyroid Nodule Features?

Journal

JOURNAL OF SURGICAL RESEARCH
Volume 256, Issue -, Pages 557-563

Publisher

ACADEMIC PRESS INC ELSEVIER SCIENCE
DOI: 10.1016/j.jss.2020.07.015

Keywords

Natural language processing; Thyroid; Ultrasound; TI-RADS

Categories

Funding

  1. National Institutes of Health [2T35DK062709-14]
  2. University of Wisconsin School of Medicine and Public Health

Ask authors/readers for more resources

Background: Critical thyroid nodule features are contained in unstructured ultrasound (US) reports. The Thyroid Imaging, Reporting, and Data System (TI-RADS) uses five key features to risk stratify nodules and recommend appropriate intervention. This study aims to analyze the quality of US reporting and the potential benefit of Natural Language Processing (NLP) systems in efficiently capturing TI-RADS features from text reports. Materials and Method: This retrospective study used free-text thyroid US reports from an academic center (A) and community hospital (B). Physicians created gold standard annotations by manually extracting TI-RADS features and clinical recommendations from reports to determine how often they were included. Similar annotations were created using an automated NLP system and compared with the gold standard. Results: Two hundred eighty-two reports contained 409 nodules at least 1-cm in maximum diameter. The gold standard identified three nodules (0.7%) which contained enough information to calculate a complete TI-RADS score. Shape was described most often (92.7% of nodules), whereas margins were described least often (11%). A median number of two TI-RADS features are reported per nodule. The NLP system was significantly less accurate than the gold standard in capturing echogenicity (27.5%) and margins (58.9%). One hundred eight nodule reports (26.4%) included clinical management recommendations, which were included more often at site A than B (33.9 versus 17%, P < 0.05). Conclusions: These results suggest a gap between current US reporting styles and those needed to implement TI-RADS and achieve NLP accuracy. Synoptic reporting should prompt more complete thyroid US reporting, improved recommendations for intervention, and better NLP performance. (C) 2020 Elsevier Inc. All rights reserved.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.5
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Review Surgery

Bariatric surgery barriers: a review using Andersen's Model of Health Services Use

Joseph R. Imbus, Corrine I. Voils, Luke M. Funk

SURGERY FOR OBESITY AND RELATED DISEASES (2018)

Editorial Material Surgery

Relationship Status After Bariatric Surgery It's Complicated

Joseph R. Imbus, Luke M. Funk

JAMA SURGERY (2018)

Article Surgery

The optimal dosing scheme for levothyroxine after thyroidectomy: A comprehensive comparison and evaluation

Nick A. Zaborek, Andy Cheng, Joseph R. Imbus, Kristin L. Long, Susan C. Pitt, Rebecca S. Sippel, David F. Schneider

SURGERY (2019)

Article Education, Scientific Disciplines

Intraoperative Feedback: A Video-Based Analysis of Faculty and Resident Perceptions

Priya H. Dedhia, Meredith Barrett, Graham Ives, Christopher P. Magas, Oliver A. Varban, Sandra L. Wong, Gurjit Sandhu

JOURNAL OF SURGICAL EDUCATION (2019)

Article Surgery

Identifying Predictors of Prolonged Levothyroxine Dose Adjustment After Thyroidectomy

Tenzin S. Atruktsang, Nick A. Zaborek, Joseph R. Imbus, Kristin Long, Susan C. Pitt, Rebecca S. Sippel, David F. Schneider

JOURNAL OF SURGICAL RESEARCH (2019)

Article Surgery

Patterns of opioid use in dialysis access procedures

Kevin C. Janek, Kyla M. Bennett, Joseph R. Imbus, Juan S. Danobeitia, Jennifer L. Philip, David M. Melnick

JOURNAL OF VASCULAR SURGERY (2020)

Article Oncology

Outcomes after completion thyroidectomy versus total thyroidectomy for differentiated thyroid cancer: A single-center experience

Priya H. Dedhia, Elizabeth M. Stoeckl, Alexandria D. McDow, Susan C. Pitt, David F. Schneider, Rebecca S. Sippel, Kristin L. Long

JOURNAL OF SURGICAL ONCOLOGY (2020)

Article Medicine, Research & Experimental

Vertical sleeve gastrectomy induces enteroendocrine cell differentiation of intestinal stem cells through bile acid signaling

Ki-Suk Kim, Bailey Ce Peck, Yu-Han Hung, Kieran Koch-Laskowski, Landon Wood, Priya H. Dedhia, Jason R. Spence, Randy J. Seeley, Praveen Sethupathy, Darleen A. Sandoval

Summary: This study found that vertical sleeve gastrectomy (VSG) increases the number of hormone-secreting enteroendocrine cells (EECs) in the intestine through bile acid signaling, which drives intestinal stem cell fate towards EEC differentiation.

JCI INSIGHT (2022)

Article Surgery

Smaller parathyroids have higher near-infrared autofluorescence intensity in hyperparathyroidism

Sang Min Lee, Priya H. Dedhia, Chengli Shen, John E. Phay

Summary: This study found that near-infrared autofluorescence intensity in patients with primary hyperparathyroidism correlated with parathyroid gland weight and patient age. This suggests that the use of near-infrared cameras may be particularly helpful in identifying smaller adenomas and in older patients.

SURGERY (2022)

Article Orthopedics

Applicability of Shoulder, Olecranon, and Wrist-based Skeletal Maturity Estimation Systems to the Modern Pediatric Population

Ryan Furdock, Andy J. Kuo, Kallie W. Chen, Raymond Liu

Summary: This study evaluated the applicability of three upper extremity skeletal maturity systems in modern pediatric populations. The results showed that there were some discrepancies in skeletal age estimates depending on the race and sex of the patient.

JOURNAL OF PEDIATRIC ORTHOPAEDICS (2023)

Article Multidisciplinary Sciences

A 3D adrenocortical carcinoma tumor platform for preclinical modeling of drug response and matrix metalloproteinase activity

Priya H. Dedhia, Hemamylammal Sivakumar, Marco A. Rodriguez, Kylie G. Nairon, Joshua M. Zent, Xuguang Zheng, Katie Jones, Liudmila V. Popova, Jennifer L. Leight, Aleksander Skardal

Summary: Adrenocortical carcinoma (ACC) has a poor prognosis due to a lack of new drugs, which is partly attributed to the absence of suitable preclinical models. In this study, a 3D tumor construct platform was successfully generated from an established ACC cell line. The platform showed expression of biomarkers associated with ACC and demonstrated decreased drug sensitivity compared to 2D cell culture. This work represents the first evidence of a 3D tumor constructs platform for ACC, which can be utilized for mechanistic studies and the development of new intervention and therapy targets.

SCIENTIFIC REPORTS (2023)

Article Surgery

Does Surgical Margin Impact Recurrence in Noninvasive Intraductal Papillary Mucinous Neoplasms? A Multi-institutional Study

Vikrom K. Dhar, Nipun B. Merchant, Sameer H. Patel, Michael J. Edwards, Koffi Wima, Joseph Imbus, Daniel E. Abbott, Sharon M. Weber, Raphael Louie, Hong J. Kim, Robert C. G. Martin, Charles R. Scoggins, David J. Bentrem, Michael T. LeCompte, Kamran Idrees, Alexandra G. Lopez-Aguiar, Shishir K. Maithel, David A. Kooby, Daniel A. Franco, Danny Yakoub, Syed A. Ahmad

ANNALS OF SURGERY (2018)

Editorial Material Surgery

Designing an Inclusive Operating Room: For All and by All

Meghal Shah, Tejas S. Sathe, Sukriti Bansal, Anai N. Kothari, Sophie Dream

JOURNAL OF SURGICAL RESEARCH (2024)

Letter Surgery

Letter Regarding: Percutaneous Pigtail Catheter Drainage of Spontaneous Intestinal Perforation in Premature Infants

Zafer Turkyilmaz, Ramazan Karabulut, Kaan Sonmez

JOURNAL OF SURGICAL RESEARCH (2024)

Review Surgery

Ex Vivo Comparison of the Elastic Properties of Vascular Substitutes Used for Pulmonary Artery Replacement

Kheira Hireche, Ludovic Canaud, Pierre Antoine Peyron, Linda Sakhri, Isabelle Serres, Sanaa Kamel, Youcef Lounes, Thomas Gandet, Pierre Alric

Summary: This study evaluated the elastic properties of commonly used vascular substitutes for pulmonary artery replacement and compared their compliance and stiffness indexes to human pulmonary artery. The results showed that allogenic arterial grafts appeared to be the most suitable vascular substitutes in terms of compliance and stiffness for PA replacement.

JOURNAL OF SURGICAL RESEARCH (2024)

Article Surgery

Association Between Nil Per Os Status and Intubated Patients Undergoing Surgery

Margaret Siu, Aixa Perez Coulter, Heather M. Grant, Reginald Alouidor, Michael Tirabassi

Summary: There is no significant difference in adverse respiratory events between intubated, critically ill patients requiring operative intervention who are kept NPO for 6 hours or longer compared to those kept NPO for less than 6 hours. Patients commonly experience periods of fasting much longer than the recommended 6-hour period by the American Society of Anesthesiologists.

JOURNAL OF SURGICAL RESEARCH (2024)

Article Surgery

Early Versus Late Feeding After Percutaneous Endoscopic Gastrostomy Placement in Trauma and Burn

Whitney Elks, Allison G. McNickle, Matthew Kelecy, Kavita Batra, Shirley Wong, Shawn Wang, Lisa Angotti, Deborah A. Kuhls, Charles St Hill, Syed F. Saquib, Paul J. Chestovich, Douglas R. Fraser

Summary: This study aimed to compare the effects of early and late enteral feeding after PEG placement on achieving nutritional therapy goals and adverse outcomes. The results showed that patients with early initiation of feeds achieved a higher percentage of goals on day 0 without an increased rate of adverse events.

JOURNAL OF SURGICAL RESEARCH (2024)

Article Surgery

Bilateral Exchange: Enteral Nutrition Clinical Decision Making in Pediatric Surgery Patients

Manisha B. Bhatia, Cassandra M. Anderson, Abdiwahab N. Hussein, Brian Opondo, Nereah Aruwa, Otieno Okumu, Sarah G. Fisher, Tasha Sparks Joplin, JoAnna L. Hunter-Squires, Brian W. Gray, Peter W. Saula

Summary: This study aimed to understand postoperative pediatric nutrition practices in Kenya and the United States. The results showed that in the United States, patients initiated enteral nutrition earlier and had shorter hospital stays. However, in Kenya, patients initiated enteral nutrition earlier but had no significant difference in hospital stays.

JOURNAL OF SURGICAL RESEARCH (2024)

Article Surgery

Raising Systemic Blood Pressure to Delay Irreversible Intestinal Ischemia in a Swine Model of Proximal Superior Mesenteric ArteryOcclusion

David P. Stonko, Joseph Edwards, Hossam Abdou, Rebecca Treffalls, Patrick Walker, Jonathan J. Morrison

Summary: Raising mean arterial pressure (MAP) >90 mmHg with norepinephrine can increase gastroduodenal artery (GDA) flow and delay bowel ischemia.

JOURNAL OF SURGICAL RESEARCH (2024)

Article Surgery

Defining Pathologic Upstaging in cT1b Esophageal Cancer: Should We Consider Neoadjuvant Therapy?

David R. Mann, Kathryn E. Engelhardt, Barry C. Gibney, Macelyn E. Batten, Eric C. Klipsch, Rupak Mukherjee, Ian C. Bostock

Summary: Pathologic upstaging is associated with decreased overall survival in cT1b esophageal cancer. Esophagectomy has better survival outcomes compared to endoscopic local tumor excision. Neoadjuvant chemoradiation therapy does not improve overall survival in cT1b lesions.

JOURNAL OF SURGICAL RESEARCH (2024)

Article Surgery

Society of Asian Academic Surgeons A Medium-Term Comparison of Quality of Life and Pain After Robotic or Laparoscopic Cholecystectomy

Ross Mudgway, Zachary Tran, Juan C. Quispe Espiritu, Woo Bin Bong, Hayden Schultz, Vamsi Vemireddy, Aarthy Kannappan, Marcos Michelotti, Kaushik Mukherjee, Jeffrey Quigley, Keith Scharf, Daniel Srikureja, Sharon S. Lum, Esther Wu

Summary: Comparison of medium-term outcomes between robotic-assisted cholecystectomy (RC) and laparoscopic cholecystectomy (LC) using validated quality of life (QoL) and pain assessments did not show significant differences.

JOURNAL OF SURGICAL RESEARCH (2024)

Article Surgery

A Comparative Study on Platelet-Rich Plasma From Elderly Individuals and Young Adults to Treat Pressure Ulcers in Mice

Ningjie Chen, Haitao Wang, Yang Shao, Jincun Yang, Guodong Song

Summary: This study aimed to compare the therapeutic effects of activated platelet-rich plasma (PRP) prepared from elderly individuals and young adults in treating pressure ulcers (PUs). The results showed that PRP from young adults had higher platelet concentrations and greater production of growth factors, leading to better wound healing.

JOURNAL OF SURGICAL RESEARCH (2024)

Article Surgery

An Institutional Curriculum for Opioid Prescribing Education: Outcomes From 2017 to 2022

Brendin R. Beaulieu-Jones, Margaret T. Berrigan, Kortney A. Robinson, Jayson S. Marwaha, Tara S. Kent, Gabriel A. Brat

Summary: Introduction: Prescription opioids, including those prescribed after surgery, have greatly contributed to the US opioid epidemic. Educating opioid prescribers is a crucial component of ensuring the safe use of opioids among surgical patients. This study implemented an annual education curriculum for new surgical prescribers, resulting in significant improvements in knowledge and comfort levels. However, there remains a persistent knowledge and comfort gap among these prescribers.

JOURNAL OF SURGICAL RESEARCH (2024)

Article Surgery

Assessing a Structured Mental Fitness Program for Academic Acute Care Surgeons: A Pilot Study

Sneha G. Bhat, Madhuri Nagaraj, Courtney Balentine, Timothy Hogan, Jennie Meier, Hillary Prince, Kareem Abdelfattah, Herbert Zeh, Benjamin Levi

Summary: This pilot study examined the effects of a structured mental fitness program on academic surgeons and found significant improvement in Positive Intelligence (PQ) scores, as well as increased connectedness and shared language among participants. However, there were no significant changes in sleep, well-being, or teaching evaluations.

JOURNAL OF SURGICAL RESEARCH (2024)

Article Surgery

Humanized Anti-Carcinoembryonic Antigen Antibodies Brightly Target and Label Gastric Cancer in Orthotopic Mouse Models

Kristin E. Cox, Michael A. Turner, Siamak Amirfakhri, Thinzar M. Lavin, Mojgan Hosseini, Pradipta Ghosh, Marygorret Obonyo, Takashi Murakami, Robert M. Hoffman, Paul J. Yazaki, Michael Bouvet

Summary: This study demonstrates the potential of using humanized anti-carcinoembryonic antigen (CEA) antibodies conjugated with near-infrared dyes to specifically label gastric cancers in mouse models. Orthotopic models showed bright and specific labeling with more than ten times higher tumor-to-background ratios compared to the control. This tumor-specific fluorescent antibody has promising potential as a clinical tool for improving visualization of gastric cancer margins during surgical resection.

JOURNAL OF SURGICAL RESEARCH (2024)

Review Surgery

Use of Broadband Personality Tests in Bariatric Surgery: A Scoping Review

Sarah Maki, Melissa Leon, Emily Glenn, Tiffany Tanner, Crystal Krause

Summary: This scoping review analyzed the literature on the use of broadband personality tests in the bariatric surgical population to optimize weight loss outcomes. The study found significant associations between personality scales and weight loss, but inconsistent reporting of outcome measures made it challenging to draw concrete conclusions. The American Society for Metabolic and Bariatric Surgery recommends standardization of outcome reporting to improve the reliability of predicting weight loss outcomes.

JOURNAL OF SURGICAL RESEARCH (2024)