Journal
JOURNAL OF MEDICAL VIROLOGY
Volume 93, Issue 5, Pages 3238-3245Publisher
WILEY
DOI: 10.1002/jmv.26678
Keywords
COVID-19; genetics; mutations; SARS-CoV-2; web application
Categories
Funding
- Ministero dell'Istruzione, dell'Universita e della Ricerca
- CINECA [HP10CC5F89]
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The webtool coronapp is designed to process user-provided SARS-CoV-2 genomic sequences and visualize the worldwide status of mutations, allowing users to categorize and monitor mutations effectively.
The avalanche of genomic data generated from the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus requires the development of tools to detect and monitor its mutations across the world. Here, we present a webtool, coronapp, dedicated to easily processing user-provided SARS-CoV-2 genomic sequences and visualizing the current worldwide status of SARS-CoV-2 mutations. The webtool allows users to highlight mutations and categorize them by frequency, country, genomic location and effect on protein sequences, and to monitor their presence in the population over time. The tool is available at for the annotation of user-provided sequences. The full code is freely shared at .
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