A genome-wide analysis of MADS-box genes in peach [Prunus persica (L.) Batsch]

Role of the FUL–SHP network in the evolution of fruit morphology and function

(2014) Cristina Ferrándiz et al.   JOURNAL OF EXPERIMENTAL BOTANY

miR824-Regulated AGAMOUS-LIKE16 Contributes to Flowering Time Repression in Arabidopsis

(2014) J.-Y. Hu et al.   PLANT CELL

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution

(2013) Ignazio Verde et al.   NATURE GENETICS

Functional Conservation of MIKC*-Type MADS Box Genes in Arabidopsis and Rice Pollen Maturation

(2013) Y. Liu et al.   PLANT CELL

FLOWERING LOCUS C in monocots and the tandem origin of angiosperm-specific MADS-box genes

(2013) Philip Ruelens et al.   Nature Communications

Developmental and evolutionary diversity of plant MADS-domain factors: insights from recent studies

(2012) C. Smaczniak et al.   DEVELOPMENT

MADS-box Genes and Floral Development: the Dark Side

(2012) K. Heijmans et al.   JOURNAL OF EXPERIMENTAL BOTANY

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Deep proteome and transcriptome mapping of a human cancer cell line

(2011) N. Nagaraj et al.   Molecular Systems Biology

HMMER web server: interactive sequence similarity searching

(2011) R. D. Finn et al.   NUCLEIC ACIDS RESEARCH

The Emerging Importance of Type I MADS Box Transcription Factors for Plant Reproduction

(2011) S. Masiero et al.   PLANT CELL

The Arabidopsis SOC1-like genes AGL42, AGL71 and AGL72 promote flowering in the shoot apical and axillary meristems

(2011) Carmen Dorca-Fornell et al.   PLANT JOURNAL

Functional and Expressional Analyses of PmDAM Genes Associated with Endodormancy in Japanese Apricot

(2011) Ryuta Sasaki et al.   PLANT PHYSIOLOGY

ConDeTri - A Content Dependent Read Trimmer for Illumina Data

(2011) Linnéa Smeds et al.   PLoS One

Identification of genes associated with growth cessation and bud dormancy entrance using a dormancy-incapable tree mutant

(2010) Sergio Jiménez et al.   BMC PLANT BIOLOGY

A SEPALLATA gene is involved in the development and ripening of strawberry (Fragaria×ananassa Duch.) fruit, a non-climacteric tissue*

(2010) Graham B. Seymour et al.   JOURNAL OF EXPERIMENTAL BOTANY

Regulation and function of SOC1, a flowering pathway integrator

(2010) J. Lee et al.   JOURNAL OF EXPERIMENTAL BOTANY

MIKC* MADS-Box Proteins: Conserved Regulators of the Gametophytic Generation of Land Plants

(2010) O. Zobell et al.   MOLECULAR BIOLOGY AND EVOLUTION

Gene expression changes during short day induced terminal bud formation in Norway spruce

(2010) DANIEL K. A. ASANTE et al.   PLANT CELL AND ENVIRONMENT

Whole-genome survey and characterization of MADS-box gene family in maize and sorghum

(2010) Yang Zhao et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Gene expression of DAM5 and DAM6 is suppressed by chilling temperatures and inversely correlated with bud break rate

(2010) S. Jiménez et al.   PLANT MOLECULAR BIOLOGY

Characterization, expression and function of DORMANCY ASSOCIATED MADS-BOX genes from leafy spurge

(2010) David P. Horvath et al.   PLANT MOLECULAR BIOLOGY

An Atlas of Type I MADS Box Gene Expression during Female Gametophyte and Seed Development in Arabidopsis

(2010) Marian Bemer et al.   PLANT PHYSIOLOGY

Make hay when the sun shines: The role of MADS-box genes in temperature-dependant seasonal flowering responses

(2010) Megan N. Hemming et al.   PLANT SCIENCE

Oscillating Gene Expression Determines Competence for Periodic Arabidopsis Root Branching

(2010) Miguel A. Moreno-Risueno et al.   SCIENCE

Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE

(2010) et al.   SCIENCE

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

Identification of genes associated with bud dormancy release in Prunus persica by suppression subtractive hybridization

(2010) C. Leida et al.   TREE PHYSIOLOGY

A hitchhiker's guide to the MADS world of plants

(2010) Lydia Gramzow et al.   GENOME BIOLOGY

Bias in Plant Gene Content Following Different Sorts of Duplication: Tandem, Whole-Genome, Segmental, or by Transposition

(2009) Michael Freeling   Annual Review of Plant Biology

Dormancy-associated MADS genes from the EVG locus of peach [Prunus persica (L.) Batsch] have distinct seasonal and photoperiodic expression patterns

(2009) Z. Li et al.   JOURNAL OF EXPERIMENTAL BOTANY

Common mechanisms regulate flowering and dormancy

(2009) David Horvath   PLANT SCIENCE

The ‘ABC’ of MADS domain protein behaviour and interactions

(2009) Richard G.H. Immink et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Transcript profiling in Vitis riparia during chilling requirement fulfillment reveals coordination of gene expression patterns with optimized bud break

(2008) Kathy Mathiason et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

AGAMOUS-LIKE 17, a novel flowering promoter, acts in aFT-independent photoperiod pathway

(2008) Ping Han et al.   PLANT JOURNAL

Further Characterization of a Rice AGL12 Group MADS-Box Gene, OsMADS26

(2008) S. Lee et al.   PLANT PHYSIOLOGY

An AGAMOUS-Related MADS-Box Gene, XAL1 (AGL12), Regulates Root Meristem Cell Proliferation and Flowering Transition in Arabidopsis

(2008) R. Tapia-Lopez et al.   PLANT PHYSIOLOGY

Genome-Wide Analysis of MIKCC-Type MADS Box Genes in Grapevine

(2008) J. Diaz-Riquelme et al.   PLANT PHYSIOLOGY