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Title
Deciphering LncRNA–protein interactions using docking complexes
Authors
Keywords
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Journal
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS
Volume -, Issue -, Pages 1-8
Publisher
Informa UK Limited
Online
2020-12-08
DOI
10.1080/07391102.2020.1850354
References
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- catRAPIDsignature: identification of ribonucleoproteins and RNA-binding regions
- (2015) Carmen Maria Livi et al. BIOINFORMATICS
- HOTAIR Forms an Intricate and Modular Secondary Structure
- (2015) Srinivas Somarowthu et al. MOLECULAR CELL
- RPI-Pred: predicting ncRNA-protein interaction using sequence and structural information
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- A knowledge-based scoring function for protein-RNA interactions derived from a statistical mechanics-based iterative method
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- (2014) Damian Szklarczyk et al. NUCLEIC ACIDS RESEARCH
- catRAPID omics: a web server for large-scale prediction of protein-RNA interactions
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- Molecular Mechanisms of Long Noncoding RNAs
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- Predicting protein associations with long noncoding RNAs
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- RNA–protein interactions in human health and disease
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- Long non-coding RNAs in nervous system function and disease
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- Long noncoding RNAs: functional surprises from the RNA world
- (2009) J. E. Wilusz et al. GENES & DEVELOPMENT
- Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
- (2009) Mitchell Guttman et al. NATURE
- Long non-coding RNAs: insights into functions
- (2009) Tim R. Mercer et al. NATURE REVIEWS GENETICS
- PROSITE, a protein domain database for functional characterization and annotation
- (2009) Christian J. A. Sigrist et al. NUCLEIC ACIDS RESEARCH
- HITS-CLIP yields genome-wide insights into brain alternative RNA processing
- (2008) Donny D. Licatalosi et al. NATURE
- Prediction of RNA binding sites in a protein using SVM and PSSM profile
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