The impact of cropping system, tillage and season on shaping soil fungal community in a long-term field trial

Greater fungal and bacterial biomass in soil large macropores under no-tillage than mouldboard ploughing

(2020) Bingjie Sun et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Minimum tillage and residue retention increase soil microbial population size and diversity: Implications for conservation tillage

(2020) Yuan Li et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Crop rotation, but not cover crops, influenced soil bacterial community composition in a corn-soybean system in southern Wisconsin

(2020) Lindsay A. Chamberlain et al.   APPLIED SOIL ECOLOGY

Tillage effects outweigh seasonal effects on soil nematode community structure

(2019) Shixiu Zhang et al.   SOIL & TILLAGE RESEARCH

Evaluating storage and pool size of soil organic carbon in degraded soils: Tillage effects when crop residue is returned

(2019) Yan Zhang et al.   SOIL & TILLAGE RESEARCH

Bacterial and fungal diversity in rhizosphere and bulk soil under different long-term tillage and cereal/legume rotation

(2019) Eunice Essel et al.   SOIL & TILLAGE RESEARCH

Long-term no-tillage and different residue amounts alter soil microbial community composition and increase the risk of maize root rot in northeast China

(2019) Huanhuan Wang et al.   SOIL & TILLAGE RESEARCH

Plant growth stages and fertilization regimes drive soil fungal community compositions in a wheat-rice rotation system

(2018) Jichen Wang et al.   BIOLOGY AND FERTILITY OF SOILS

Fertilizer N application rate impacts plant-soil feedback in a sanqi production system

(2018) Wei Wei et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Tillage Changes Vertical Distribution of Soil Bacterial and Fungal Communities

(2018) Ruibo Sun et al.   Frontiers in Microbiology

Fungal Biodiversity and Their Role in Soil Health

(2018) Magdalena Frąc et al.   Frontiers in Microbiology

Cover cropping and no-till increase diversity and symbiotroph:saprotroph ratios of soil fungal communities

(2018) Radomir Schmidt et al.   SOIL BIOLOGY & BIOCHEMISTRY

Responses of soil organic carbon decomposition and microbial community to the addition of plant residues with different C:N ratio

(2017) Xiao Liang et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Temporal Dynamics of Soil Microbial Communities below the Seedbed under Two Contrasting Tillage Regimes

(2017) Florine Degrune et al.   Frontiers in Microbiology

Changes in the composition and diversity of topsoil bacterial, archaeal and fungal communities after 22 years conventional and no-tillage managements in Northern China

(2017) Wenyi Dong et al.   Archives of Agronomy and Soil Science

Long-term no-till: A major driver of fungal communities in dryland wheat cropping systems

(2017) Dipak Sharma-Poudyal et al.   PLoS One

No favorable effect of reduced tillage on microbial community diversity in a silty loam soil (Belgium)

(2016) Florine Degrune et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

The legacy effect of cover crops on soil fungal populations in a cereal rotation

(2016) Andrew P. Detheridge et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Responses of soil fungi to 5-year conservation tillage treatments in the drylands of northern China

(2016) Ziting Wang et al.   APPLIED SOIL ECOLOGY

FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild

(2016) Nhu H. Nguyen et al.   Fungal Ecology

An Underground Revolution: Biodiversity and Soil Ecological Engineering for Agricultural Sustainability

(2016) S. Franz Bender et al.   TRENDS IN ECOLOGY & EVOLUTION

Microbial community responses to soil tillage and crop rotation in a corn/soybean agroecosystem

(2016) Chris R. Smith et al.   Ecology and Evolution

A novel sub-phylum method discriminates better the impact of crop management on soil microbial community

(2015) Florine Degrune et al.   Agronomy for Sustainable Development

Analysis of the community compositions of rhizosphere fungi in soybeans continuous cropping fields

(2015) Li Bai et al.   MICROBIOLOGICAL RESEARCH

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Short-term effect of tillage and crop rotation on microbial community structure and enzyme activities of a clay loam soil

(2014) Bin Zhang et al.   BIOLOGY AND FERTILITY OF SOILS

A first comprehensive census of fungi in soil reveals both hyperdiversity and fine-scale niche partitioning

(2013) D. Lee Taylor et al.   ECOLOGICAL MONOGRAPHS

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Alternaria redefined

(2013) J.H.C. Woudenberg et al.   STUDIES IN MYCOLOGY

Soil aggregation and total diversity of bacteria and fungi in various tillage systems of sub-humid and semi-arid Kenya

(2012) J. Kihara et al.   APPLIED SOIL ECOLOGY

Tillage and rotation effects on crop yield and profitability on a Black soil in northeast China

(2012) Ruqin Fan et al.   CANADIAN JOURNAL OF SOIL SCIENCE

Tillage-induced changes in the functional diversity of soil biota – A review with a focus on German data

(2012) Christine van Capelle et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Soil microbial community dynamics over a maize (Zea mays L.) growing season under conventional- and no-tillage practices in a rainfed agroecosystem

(2012) Bin Zhang et al.   SOIL & TILLAGE RESEARCH

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Assessing the effect of organic residue quality on active decomposing fungi in a tropical Vertisol using 15N-DNA stable isotope probing

(2010) Mingrelia España et al.   Fungal Ecology

The UNITE database for molecular identification of fungi - recent updates and future perspectives

(2010) Kessy Abarenkov et al.   NEW PHYTOLOGIST

Tillage, residue burning and crop rotation alter soil fungal community and water-stable aggregation in arable fields

(2010) Yin Wang et al.   SOIL & TILLAGE RESEARCH

Fungal community diversity and soil health in intensive potato cropping systems of the east Po valley, northern Italy

(2009) L.M. Manici et al.   ANNALS OF APPLIED BIOLOGY

Testing the functional significance of microbial community composition

(2009) Michael S. Strickland et al.   ECOLOGY

Wood-inhabiting ligninolytic basidiomycetes in soils: Ecology and constraints for applicability in bioremediation

(2008) Petr Baldrian   Fungal Ecology