Automatic Skull Stripping of Rat and Mouse Brain MRI Data Using U-Net

Automatic Brain Extraction for Rodent MRI Images

(2020) Yikang Liu et al.   NEUROINFORMATICS

Animal Functional Magnetic Resonance Imaging: Trends and Path Toward Standardization

(2020) Francesca Mandino et al.   Frontiers in Neuroinformatics

A Survey on Distributed Machine Learning

(2020) Joost Verbraeken et al.   ACM COMPUTING SURVEYS

CT Male Pelvic Organ Segmentation via Hybrid Loss Network With Incomplete Annotation

(2020) Shuai Wang et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Iterative Label Denoising Network: Segmenting Male Pelvic Organs in CT From 3D Bounding Box Annotations

(2020) Shuai Wang et al.   IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING

A brain-wide functional map of the serotonergic responses to acute stress and fluoxetine

(2019) Joanes Grandjean et al.   Nature Communications

Towards an efficient segmentation of small rodents brain: A short critical review

(2019) Riccardo Feo et al.   JOURNAL OF NEUROSCIENCE METHODS

Temporal stability of fMRI in medetomidine-anesthetized rats

(2019) Nikoloz Sirmpilatze et al.   Scientific Reports

Common functional networks in the mouse brain revealed by multi-centre resting-state fMRI analysis

(2019) Joanes Grandjean et al.   NEUROIMAGE

Multimodal Machine Learning: A Survey and Taxonomy

(2018) Tadas Baltrusaitis et al.   IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE

Functional atlas of the awake rat brain: A neuroimaging study of rat brain specialization and integration

(2018) Zhiwei Ma et al.   NEUROIMAGE

A non-invasive restraining system for awake mouse imaging

(2017) Dan Madularu et al.   JOURNAL OF NEUROSCIENCE METHODS

Brain tumor segmentation with Deep Neural Networks

(2017) Mohammad Havaei et al.   MEDICAL IMAGE ANALYSIS

Functional circuit mapping of striatal output nuclei using simultaneous deep brain stimulation and fMRI

(2017) Nathalie Van Den Berge et al.   NEUROIMAGE

Deep MRI brain extraction: A 3D convolutional neural network for skull stripping

(2016) Jens Kleesiek et al.   NEUROIMAGE

Functional Magnetic Resonance Imaging of Electrical and Optogenetic Deep Brain Stimulation at the Rat Nucleus Accumbens

(2016) Daniel L. Albaugh et al.   Scientific Reports

Multi-Atlas Skull-Stripping

(2013) Jimit Doshi et al.   ACADEMIC RADIOLOGY

RATS: Rapid Automatic Tissue Segmentation in rodent brain MRI

(2013) Ipek Oguz et al.   JOURNAL OF NEUROSCIENCE METHODS

Deformation-based brain morphometry in rats

(2012) Christian Gaser et al.   NEUROIMAGE

Robust Automatic Rodent Brain Extraction Using 3-D Pulse-Coupled Neural Networks (PCNN)

(2011) Nigel Chou et al.   IEEE TRANSACTIONS ON IMAGE PROCESSING

Brain MAPS: An automated, accurate and robust brain extraction technique using a template library

(2011) Kelvin K. Leung et al.   NEUROIMAGE

LOGISMOS—Layered Optimal Graph Image Segmentation of Multiple Objects and Surfaces: Cartilage Segmentation in the Knee Joint

(2010) Yin Yin et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Registering and analyzing rat fMRI data in the stereotaxic framework by exploiting intrinsic anatomical features

(2009) Hanbing Lu et al.   MAGNETIC RESONANCE IMAGING

An evaluation of four automatic methods of segmenting the subcortical structures in the brain

(2009) Kolawole Oluwole Babalola et al.   NEUROIMAGE

Measurement of the Dynamic Shear Modulus of Mouse Brain Tissue In Vivo by Magnetic Resonance Elastography

(2008) Stefan M. Atay et al.   JOURNAL OF BIOMECHANICAL ENGINEERING-TRANSACTIONS OF THE ASME

Automated segmentation of the actively stained mouse brain using multi-spectral MR microscopy

(2007) Anjum A. Sharief et al.   NEUROIMAGE