Diverged and Active Partitiviruses in Lichen

Bottleneck Size-Dependent Changes in the Genetic Diversity and Specific Growth Rate of a Rotavirus A Strain

(2020) Syun-suke Kadoya et al.   JOURNAL OF VIROLOGY

Algal-fungal symbiosis leads to photosynthetic mycelium

(2019) Zhi-Yan Du et al.   eLife

No support for the emergence of lichens prior to the evolution of vascular plants

(2019) Matthew P. Nelsen et al.   Geobiology

dsRNA-Seq: Identification of Viral Infection by Purifying and Sequencing dsRNA

(2019) Carolyn J. Decker et al.   Viruses-Basel

A new polycipivirus identified in Colobopsis shohki

(2019) Fumika Fukasawa et al.   ARCHIVES OF VIROLOGY

Chrysoviruses Inhabited Symbiotic Fungi of Lichens

(2019) Karel Petrzik et al.   Viruses-Basel

The evolutionary history of vertebrate RNA viruses

(2018) Mang Shi et al.   NATURE

The hidden diversity of lichenised Trebouxiophyceae (Chlorophyta)

(2018) Lucia Muggia et al.   PHYCOLOGIA

Tombusvirus RNA replication depends on the TOR pathway in yeast and plants

(2018) Jun-ichi Inaba et al.   VIROLOGY

Metagenomics reshapes the concepts of RNA virus evolution by revealing extensive horizontal virus transfer

(2018) Valerian V. Dolja et al.   VIRUS RESEARCH

Unveiling the RNA virosphere associated with marine microorganisms

(2018) Syun-ichi Urayama et al.   Molecular Ecology Resources

Evolutionary and ecological links between plant and fungal viruses

(2018) Marilyn J. Roossinck   NEW PHYTOLOGIST

Contemporaneous radiations of fungi and plants linked to symbiosis

(2018) François Lutzoni et al.   Nature Communications

Phytopathogenic fungus hosts a plant virus: A naturally occurring cross-kingdom viral infection

(2017) Ida Bagus Andika et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mycoviruses of an endophytic fungus can replicate in plant cells: evolutionary implications

(2017) L. Nerva et al.   Scientific Reports

FLDS: A Comprehensive dsRNA Sequencing Method for Intracellular RNA Virus Surveillance

(2016) Syun-ichi Urayama et al.   MICROBES AND ENVIRONMENTS

Redefining the invertebrate RNA virosphere

(2016) Mang Shi et al.   NATURE

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists

(2015) Annegret Kohler et al.   NATURE GENETICS

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Taxonomic reorganization of family Partitiviridae and other recent progress in partitivirus research

(2014) Max L. Nibert et al.   VIRUS RESEARCH

Lichens—a new source or yet unknown host of herbaceous plant viruses?

(2013) Karel Petrzik et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data

(2012) Evguenia Kopylova et al.   BIOINFORMATICS

Are we missing half of the viruses in the ocean?

(2012) Grieg F Steward et al.   ISME Journal

The earliest records of internally stratified cyanobacterial and algal lichens from the Lower Devonian of the Welsh Borderland

(2012) Rosmarie Honegger et al.   NEW PHYTOLOGIST

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Kakusan4 and Aminosan: two programs for comparing nonpartitioned, proportional and separate models for combined molecular phylogenetic analyses of multilocus sequence data

(2011) AKIFUMI S. TANABE   Molecular Ecology Resources

EMIRGE: reconstruction of full-length ribosomal genes from microbial community short read sequencing data

(2011) Christopher S Miller et al.   GENOME BIOLOGY

Ecogenomics: using massively parallel pyrosequencing to understand virus ecology

(2010) MARILYN J. ROOSSINCK et al.   MOLECULAR ECOLOGY

Complete nucleotide sequence of double-stranded RNA viruses from Fusarium graminearum strain DK3

(2009) Jisuk Yu et al.   ARCHIVES OF VIROLOGY

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Genome packaging in influenza A virus

(2009) E. C. Hutchinson et al.   JOURNAL OF GENERAL VIROLOGY